Protein–RNA interactions for Protein: Q9H611

PIF1, ATP-dependent DNA helicase PIF1, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1Q9H611 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
PIF1Q9H611 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC17.82■□□□□ 0.44
PIF1Q9H611 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC17.82■□□□□ 0.44
PIF1Q9H611 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PIF1Q9H611 APTR-205ENST00000447009 902 ntTSL 2 BASIC17.82■□□□□ 0.44
PIF1Q9H611 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC17.82■□□□□ 0.44
PIF1Q9H611 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC17.82■□□□□ 0.44
PIF1Q9H611 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
PIF1Q9H611 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC17.82■□□□□ 0.44
PIF1Q9H611 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
PIF1Q9H611 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PIF1Q9H611 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PIF1Q9H611 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC17.82■□□□□ 0.44
PIF1Q9H611 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PIF1Q9H611 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PIF1Q9H611 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PIF1Q9H611 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PIF1Q9H611 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
PIF1Q9H611 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
PIF1Q9H611 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC17.81■□□□□ 0.44
PIF1Q9H611 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PIF1Q9H611 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PIF1Q9H611 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PIF1Q9H611 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC17.81■□□□□ 0.44
PIF1Q9H611 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC17.81■□□□□ 0.44
PIF1Q9H611 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PIF1Q9H611 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC17.81■□□□□ 0.44
PIF1Q9H611 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC17.81■□□□□ 0.44
PIF1Q9H611 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PIF1Q9H611 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17.81■□□□□ 0.44
PIF1Q9H611 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PIF1Q9H611 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PIF1Q9H611 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
PIF1Q9H611 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
PIF1Q9H611 TSPY21P-201ENST00000433481 731 ntBASIC17.81■□□□□ 0.44
PIF1Q9H611 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
PIF1Q9H611 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC17.81■□□□□ 0.44
PIF1Q9H611 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC17.81■□□□□ 0.44
PIF1Q9H611 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC17.81■□□□□ 0.44
PIF1Q9H611 AC008687.6-201ENST00000596318 630 ntBASIC17.81■□□□□ 0.44
PIF1Q9H611 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PIF1Q9H611 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PIF1Q9H611 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PIF1Q9H611 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC17.81■□□□□ 0.44
PIF1Q9H611 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC17.81■□□□□ 0.44
PIF1Q9H611 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PIF1Q9H611 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
PIF1Q9H611 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC17.81■□□□□ 0.44
PIF1Q9H611 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
PIF1Q9H611 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PIF1Q9H611 EML3-212ENST00000494176 2901 ntTSL 2 BASIC17.81■□□□□ 0.44
PIF1Q9H611 EML3-216ENST00000529309 2909 ntTSL 2 BASIC17.81■□□□□ 0.44
PIF1Q9H611 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PIF1Q9H611 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PIF1Q9H611 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC17.81■□□□□ 0.44
PIF1Q9H611 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PIF1Q9H611 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
PIF1Q9H611 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PIF1Q9H611 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
PIF1Q9H611 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PIF1Q9H611 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC17.8■□□□□ 0.44
PIF1Q9H611 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
PIF1Q9H611 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PIF1Q9H611 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PIF1Q9H611 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC17.8■□□□□ 0.44
PIF1Q9H611 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PIF1Q9H611 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PIF1Q9H611 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
PIF1Q9H611 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PIF1Q9H611 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PIF1Q9H611 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PIF1Q9H611 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PIF1Q9H611 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PIF1Q9H611 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC17.8■□□□□ 0.44
PIF1Q9H611 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
PIF1Q9H611 TREX2-204ENST00000370212 861 ntTSL 5 BASIC17.8■□□□□ 0.44
PIF1Q9H611 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
PIF1Q9H611 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
PIF1Q9H611 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC17.8■□□□□ 0.44
PIF1Q9H611 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC17.8■□□□□ 0.44
PIF1Q9H611 KLF13-207ENST00000560473 489 ntTSL 3 BASIC17.8■□□□□ 0.44
PIF1Q9H611 AL160286.2-201ENST00000567150 934 ntBASIC17.8■□□□□ 0.44
PIF1Q9H611 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC17.8■□□□□ 0.44
PIF1Q9H611 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PIF1Q9H611 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC17.8■□□□□ 0.44
PIF1Q9H611 KLF2-202ENST00000592003 564 ntTSL 3 BASIC17.8■□□□□ 0.44
PIF1Q9H611 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC17.8■□□□□ 0.44
PIF1Q9H611 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC17.8■□□□□ 0.44
PIF1Q9H611 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
PIF1Q9H611 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PIF1Q9H611 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PIF1Q9H611 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
PIF1Q9H611 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PIF1Q9H611 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
PIF1Q9H611 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
PIF1Q9H611 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC17.8■□□□□ 0.44
PIF1Q9H611 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC17.8■□□□□ 0.44
PIF1Q9H611 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PIF1Q9H611 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC17.8■□□□□ 0.44
PIF1Q9H611 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms