Protein–RNA interactions for Protein: Q9H2C1

LHX5, LIM/homeobox protein Lhx5, humanhuman

Predictions only

Length 402 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX5Q9H2C1 AC009113.1-201ENST00000570267 2443 ntBASIC19.66■□□□□ 0.74
LHX5Q9H2C1 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC19.66■□□□□ 0.74
LHX5Q9H2C1 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
LHX5Q9H2C1 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LHX5Q9H2C1 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC19.66■□□□□ 0.74
LHX5Q9H2C1 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC19.66■□□□□ 0.74
LHX5Q9H2C1 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
LHX5Q9H2C1 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
LHX5Q9H2C1 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
LHX5Q9H2C1 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
LHX5Q9H2C1 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LHX5Q9H2C1 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC19.65■□□□□ 0.74
LHX5Q9H2C1 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LHX5Q9H2C1 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
LHX5Q9H2C1 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
LHX5Q9H2C1 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC19.65■□□□□ 0.74
LHX5Q9H2C1 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
LHX5Q9H2C1 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
LHX5Q9H2C1 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC19.65■□□□□ 0.74
LHX5Q9H2C1 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
LHX5Q9H2C1 AL137013.1-201ENST00000432946 1228 ntBASIC19.65■□□□□ 0.74
LHX5Q9H2C1 KRT18P57-201ENST00000443599 1254 ntBASIC19.65■□□□□ 0.74
LHX5Q9H2C1 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC19.65■□□□□ 0.74
LHX5Q9H2C1 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
LHX5Q9H2C1 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC19.65■□□□□ 0.74
LHX5Q9H2C1 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
LHX5Q9H2C1 CYP51A1P1-201ENST00000492267 1507 ntBASIC19.65■□□□□ 0.74
LHX5Q9H2C1 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC19.65■□□□□ 0.74
LHX5Q9H2C1 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC19.65■□□□□ 0.74
LHX5Q9H2C1 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC19.65■□□□□ 0.74
LHX5Q9H2C1 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
LHX5Q9H2C1 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
LHX5Q9H2C1 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
LHX5Q9H2C1 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
LHX5Q9H2C1 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
LHX5Q9H2C1 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
LHX5Q9H2C1 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
LHX5Q9H2C1 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
LHX5Q9H2C1 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.74
LHX5Q9H2C1 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LHX5Q9H2C1 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LHX5Q9H2C1 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LHX5Q9H2C1 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
LHX5Q9H2C1 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
LHX5Q9H2C1 SLC25A3P1-201ENST00000443844 931 ntBASIC19.64■□□□□ 0.73
LHX5Q9H2C1 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC19.64■□□□□ 0.73
LHX5Q9H2C1 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC19.64■□□□□ 0.73
LHX5Q9H2C1 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC19.64■□□□□ 0.73
LHX5Q9H2C1 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
LHX5Q9H2C1 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
LHX5Q9H2C1 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
LHX5Q9H2C1 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
LHX5Q9H2C1 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC19.64■□□□□ 0.73
LHX5Q9H2C1 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
LHX5Q9H2C1 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LHX5Q9H2C1 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC19.63■□□□□ 0.73
LHX5Q9H2C1 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LHX5Q9H2C1 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LHX5Q9H2C1 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
LHX5Q9H2C1 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
LHX5Q9H2C1 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC19.63■□□□□ 0.73
LHX5Q9H2C1 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC19.63■□□□□ 0.73
LHX5Q9H2C1 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC19.63■□□□□ 0.73
LHX5Q9H2C1 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LHX5Q9H2C1 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LHX5Q9H2C1 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
LHX5Q9H2C1 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
LHX5Q9H2C1 TERF1P1-201ENST00000311003 1181 ntBASIC19.63■□□□□ 0.73
LHX5Q9H2C1 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC19.63■□□□□ 0.73
LHX5Q9H2C1 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
LHX5Q9H2C1 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
LHX5Q9H2C1 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
LHX5Q9H2C1 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
LHX5Q9H2C1 KRT18P23-201ENST00000435622 1283 ntBASIC19.63■□□□□ 0.73
LHX5Q9H2C1 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
LHX5Q9H2C1 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
LHX5Q9H2C1 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
LHX5Q9H2C1 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC19.63■□□□□ 0.73
LHX5Q9H2C1 AL049597.2-201ENST00000565575 961 ntBASIC19.63■□□□□ 0.73
LHX5Q9H2C1 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
LHX5Q9H2C1 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LHX5Q9H2C1 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
LHX5Q9H2C1 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC19.63■□□□□ 0.73
LHX5Q9H2C1 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC19.63■□□□□ 0.73
LHX5Q9H2C1 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LHX5Q9H2C1 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
LHX5Q9H2C1 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LHX5Q9H2C1 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC19.62■□□□□ 0.73
LHX5Q9H2C1 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC19.62■□□□□ 0.73
LHX5Q9H2C1 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LHX5Q9H2C1 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
LHX5Q9H2C1 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LHX5Q9H2C1 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
LHX5Q9H2C1 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
LHX5Q9H2C1 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
LHX5Q9H2C1 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC19.62■□□□□ 0.73
LHX5Q9H2C1 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LHX5Q9H2C1 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LHX5Q9H2C1 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LHX5Q9H2C1 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms