Protein–RNA interactions for Protein: Q9C040

TRIM2, Tripartite motif-containing protein 2, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2Q9C040 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
TRIM2Q9C040 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRIM2Q9C040 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRIM2Q9C040 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRIM2Q9C040 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRIM2Q9C040 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC17.18■□□□□ 0.34
TRIM2Q9C040 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRIM2Q9C040 KRT17P2-201ENST00000300992 1314 ntBASIC17.18■□□□□ 0.34
TRIM2Q9C040 SRI-203ENST00000419179 1307 ntTSL 2 BASIC17.18■□□□□ 0.34
TRIM2Q9C040 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
TRIM2Q9C040 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC17.18■□□□□ 0.34
TRIM2Q9C040 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TRIM2Q9C040 AC079598.2-202ENST00000546624 1451 ntBASIC17.18■□□□□ 0.34
TRIM2Q9C040 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRIM2Q9C040 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRIM2Q9C040 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRIM2Q9C040 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TRIM2Q9C040 MTMR9LP-203ENST00000426597 1545 ntBASIC17.17■□□□□ 0.34
TRIM2Q9C040 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC17.17■□□□□ 0.34
TRIM2Q9C040 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRIM2Q9C040 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC17.17■□□□□ 0.34
TRIM2Q9C040 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC17.17■□□□□ 0.34
TRIM2Q9C040 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
TRIM2Q9C040 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.17■□□□□ 0.34
TRIM2Q9C040 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
TRIM2Q9C040 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TRIM2Q9C040 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
TRIM2Q9C040 FAM197Y1-201ENST00000421178 764 ntBASIC17.17■□□□□ 0.34
TRIM2Q9C040 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC17.17■□□□□ 0.34
TRIM2Q9C040 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC17.17■□□□□ 0.34
TRIM2Q9C040 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC17.17■□□□□ 0.34
TRIM2Q9C040 GXYLT1P3-201ENST00000453058 1193 ntBASIC17.17■□□□□ 0.34
TRIM2Q9C040 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC17.17■□□□□ 0.34
TRIM2Q9C040 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC17.17■□□□□ 0.34
TRIM2Q9C040 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TRIM2Q9C040 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC17.17■□□□□ 0.34
TRIM2Q9C040 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC17.17■□□□□ 0.34
TRIM2Q9C040 CD177P1-201ENST00000606252 935 ntBASIC17.17■□□□□ 0.34
TRIM2Q9C040 AP000692.2-201ENST00000608391 879 ntBASIC17.17■□□□□ 0.34
TRIM2Q9C040 AC113410.3-201ENST00000623366 203 ntBASIC17.17■□□□□ 0.34
TRIM2Q9C040 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TRIM2Q9C040 AC104581.1-202ENST00000635932 2618 ntBASIC17.17■□□□□ 0.34
TRIM2Q9C040 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRIM2Q9C040 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC17.17■□□□□ 0.34
TRIM2Q9C040 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC17.17■□□□□ 0.34
TRIM2Q9C040 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRIM2Q9C040 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
TRIM2Q9C040 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRIM2Q9C040 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC17.16■□□□□ 0.34
TRIM2Q9C040 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TRIM2Q9C040 ADK-206ENST00000541550 2222 ntTSL 2 BASIC17.16■□□□□ 0.34
TRIM2Q9C040 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC17.16■□□□□ 0.34
TRIM2Q9C040 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TRIM2Q9C040 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRIM2Q9C040 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRIM2Q9C040 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRIM2Q9C040 NEFHP1-201ENST00000412845 2629 ntBASIC17.16■□□□□ 0.34
TRIM2Q9C040 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRIM2Q9C040 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC17.16■□□□□ 0.34
TRIM2Q9C040 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
TRIM2Q9C040 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
TRIM2Q9C040 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
TRIM2Q9C040 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
TRIM2Q9C040 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRIM2Q9C040 AC073592.3-201ENST00000625118 1834 ntBASIC17.16■□□□□ 0.34
TRIM2Q9C040 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRIM2Q9C040 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC17.16■□□□□ 0.34
TRIM2Q9C040 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC17.16■□□□□ 0.34
TRIM2Q9C040 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TRIM2Q9C040 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRIM2Q9C040 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRIM2Q9C040 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC17.16■□□□□ 0.34
TRIM2Q9C040 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRIM2Q9C040 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
TRIM2Q9C040 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRIM2Q9C040 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRIM2Q9C040 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRIM2Q9C040 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TRIM2Q9C040 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRIM2Q9C040 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC17.15■□□□□ 0.34
TRIM2Q9C040 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRIM2Q9C040 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
TRIM2Q9C040 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC17.15■□□□□ 0.34
TRIM2Q9C040 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC17.15■□□□□ 0.34
TRIM2Q9C040 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TRIM2Q9C040 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
TRIM2Q9C040 DHDH-203ENST00000522614 776 ntTSL 5 BASIC17.15■□□□□ 0.34
TRIM2Q9C040 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC17.15■□□□□ 0.34
TRIM2Q9C040 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC17.15■□□□□ 0.34
TRIM2Q9C040 MIR4785-201ENST00000585005 73 ntBASIC17.15■□□□□ 0.34
TRIM2Q9C040 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC17.15■□□□□ 0.34
TRIM2Q9C040 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRIM2Q9C040 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC17.15■□□□□ 0.34
TRIM2Q9C040 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TRIM2Q9C040 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
TRIM2Q9C040 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRIM2Q9C040 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC17.15■□□□□ 0.34
TRIM2Q9C040 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRIM2Q9C040 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRIM2Q9C040 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms