Protein–RNA interactions for Protein: Q9BSE4

HERPUD2, Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 2 protein, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2Q9BSE4 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
HERPUD2Q9BSE4 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HERPUD2Q9BSE4 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC19.34■□□□□ 0.69
HERPUD2Q9BSE4 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
HERPUD2Q9BSE4 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC19.34■□□□□ 0.69
HERPUD2Q9BSE4 FDX2-206ENST00000492239 773 ntTSL 2 BASIC19.34■□□□□ 0.69
HERPUD2Q9BSE4 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC19.34■□□□□ 0.69
HERPUD2Q9BSE4 REXO2-216ENST00000544196 452 ntTSL 3 BASIC19.34■□□□□ 0.69
HERPUD2Q9BSE4 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
HERPUD2Q9BSE4 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HERPUD2Q9BSE4 AC099343.3-201ENST00000605834 2503 ntBASIC19.34■□□□□ 0.69
HERPUD2Q9BSE4 AL162741.1-201ENST00000565563 1558 ntBASIC19.34■□□□□ 0.69
HERPUD2Q9BSE4 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HERPUD2Q9BSE4 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC19.34■□□□□ 0.69
HERPUD2Q9BSE4 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HERPUD2Q9BSE4 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
HERPUD2Q9BSE4 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
HERPUD2Q9BSE4 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
HERPUD2Q9BSE4 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC19.34■□□□□ 0.69
HERPUD2Q9BSE4 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC19.34■□□□□ 0.69
HERPUD2Q9BSE4 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
HERPUD2Q9BSE4 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC19.33■□□□□ 0.69
HERPUD2Q9BSE4 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC19.33■□□□□ 0.69
HERPUD2Q9BSE4 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
HERPUD2Q9BSE4 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.33■□□□□ 0.69
HERPUD2Q9BSE4 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC19.33■□□□□ 0.69
HERPUD2Q9BSE4 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC19.33■□□□□ 0.69
HERPUD2Q9BSE4 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
HERPUD2Q9BSE4 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
HERPUD2Q9BSE4 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC19.33■□□□□ 0.69
HERPUD2Q9BSE4 AC093677.2-201ENST00000600169 1863 ntBASIC19.33■□□□□ 0.69
HERPUD2Q9BSE4 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
HERPUD2Q9BSE4 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
HERPUD2Q9BSE4 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
HERPUD2Q9BSE4 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
HERPUD2Q9BSE4 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC19.33■□□□□ 0.69
HERPUD2Q9BSE4 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
HERPUD2Q9BSE4 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC19.33■□□□□ 0.68
HERPUD2Q9BSE4 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC19.33■□□□□ 0.68
HERPUD2Q9BSE4 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC19.33■□□□□ 0.68
HERPUD2Q9BSE4 MIR4497-201ENST00000583208 89 ntBASIC19.33■□□□□ 0.68
HERPUD2Q9BSE4 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
HERPUD2Q9BSE4 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC19.33■□□□□ 0.68
HERPUD2Q9BSE4 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.68
HERPUD2Q9BSE4 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
HERPUD2Q9BSE4 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
HERPUD2Q9BSE4 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC19.33■□□□□ 0.68
HERPUD2Q9BSE4 GPAT2P1-201ENST00000444924 1672 ntBASIC19.33■□□□□ 0.68
HERPUD2Q9BSE4 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
HERPUD2Q9BSE4 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC19.33■□□□□ 0.68
HERPUD2Q9BSE4 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC19.32■□□□□ 0.68
HERPUD2Q9BSE4 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC19.32■□□□□ 0.68
HERPUD2Q9BSE4 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
HERPUD2Q9BSE4 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HERPUD2Q9BSE4 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
HERPUD2Q9BSE4 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC19.32■□□□□ 0.68
HERPUD2Q9BSE4 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HERPUD2Q9BSE4 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HERPUD2Q9BSE4 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
HERPUD2Q9BSE4 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC19.32■□□□□ 0.68
HERPUD2Q9BSE4 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HERPUD2Q9BSE4 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC19.32■□□□□ 0.68
HERPUD2Q9BSE4 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
HERPUD2Q9BSE4 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
HERPUD2Q9BSE4 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC19.32■□□□□ 0.68
HERPUD2Q9BSE4 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
HERPUD2Q9BSE4 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC19.32■□□□□ 0.68
HERPUD2Q9BSE4 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC19.32■□□□□ 0.68
HERPUD2Q9BSE4 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC19.32■□□□□ 0.68
HERPUD2Q9BSE4 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC19.32■□□□□ 0.68
HERPUD2Q9BSE4 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC19.32■□□□□ 0.68
HERPUD2Q9BSE4 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
HERPUD2Q9BSE4 AL109659.2-201ENST00000606809 1674 ntBASIC19.32■□□□□ 0.68
HERPUD2Q9BSE4 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC19.32■□□□□ 0.68
HERPUD2Q9BSE4 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC19.32■□□□□ 0.68
HERPUD2Q9BSE4 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HERPUD2Q9BSE4 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
HERPUD2Q9BSE4 AC112777.1-201ENST00000540175 1423 ntBASIC19.32■□□□□ 0.68
HERPUD2Q9BSE4 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
HERPUD2Q9BSE4 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC19.32■□□□□ 0.68
HERPUD2Q9BSE4 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC19.32■□□□□ 0.68
HERPUD2Q9BSE4 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HERPUD2Q9BSE4 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HERPUD2Q9BSE4 AC096733.2-201ENST00000609937 1394 ntBASIC19.32■□□□□ 0.68
HERPUD2Q9BSE4 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC19.31■□□□□ 0.68
HERPUD2Q9BSE4 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
HERPUD2Q9BSE4 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC19.31■□□□□ 0.68
HERPUD2Q9BSE4 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HERPUD2Q9BSE4 AC008764.6-201ENST00000595909 2069 ntBASIC19.31■□□□□ 0.68
HERPUD2Q9BSE4 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC19.31■□□□□ 0.68
HERPUD2Q9BSE4 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
HERPUD2Q9BSE4 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
HERPUD2Q9BSE4 FSCN1P1-201ENST00000568912 1481 ntBASIC19.31■□□□□ 0.68
HERPUD2Q9BSE4 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HERPUD2Q9BSE4 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC19.31■□□□□ 0.68
HERPUD2Q9BSE4 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
HERPUD2Q9BSE4 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HERPUD2Q9BSE4 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
HERPUD2Q9BSE4 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
HERPUD2Q9BSE4 AL023284.2-201ENST00000405850 579 ntBASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms