Protein–RNA interactions for Protein: Q9BRG1

VPS25, Vacuolar protein-sorting-associated protein 25, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25Q9BRG1 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
VPS25Q9BRG1 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
VPS25Q9BRG1 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
VPS25Q9BRG1 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
VPS25Q9BRG1 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC13.03□□□□□ -0.32
VPS25Q9BRG1 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC13.03□□□□□ -0.32
VPS25Q9BRG1 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC13.03□□□□□ -0.32
VPS25Q9BRG1 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC13.03□□□□□ -0.32
VPS25Q9BRG1 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
VPS25Q9BRG1 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
VPS25Q9BRG1 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC13.03□□□□□ -0.32
VPS25Q9BRG1 FAM171B-201ENST00000304698 5826 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
VPS25Q9BRG1 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
VPS25Q9BRG1 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
VPS25Q9BRG1 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
VPS25Q9BRG1 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
VPS25Q9BRG1 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
VPS25Q9BRG1 AC108860.2-201ENST00000562760 2183 ntBASIC13.03□□□□□ -0.32
VPS25Q9BRG1 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
VPS25Q9BRG1 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
VPS25Q9BRG1 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC13.03□□□□□ -0.32
VPS25Q9BRG1 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
VPS25Q9BRG1 ADAMTS7P1-201ENST00000613213 4793 ntBASIC13.03□□□□□ -0.32
VPS25Q9BRG1 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
VPS25Q9BRG1 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
VPS25Q9BRG1 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
VPS25Q9BRG1 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC13.03□□□□□ -0.32
VPS25Q9BRG1 GFER-205ENST00000569451 517 ntTSL 5 BASIC13.03□□□□□ -0.32
VPS25Q9BRG1 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
VPS25Q9BRG1 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC13.03□□□□□ -0.32
VPS25Q9BRG1 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
VPS25Q9BRG1 DBET-201ENST00000630918 3363 ntBASIC13.03□□□□□ -0.32
VPS25Q9BRG1 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
VPS25Q9BRG1 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC13.03□□□□□ -0.32
VPS25Q9BRG1 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
VPS25Q9BRG1 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
VPS25Q9BRG1 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
VPS25Q9BRG1 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
VPS25Q9BRG1 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC13.03□□□□□ -0.32
VPS25Q9BRG1 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
VPS25Q9BRG1 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
VPS25Q9BRG1 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC13.03□□□□□ -0.32
VPS25Q9BRG1 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
VPS25Q9BRG1 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
VPS25Q9BRG1 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
VPS25Q9BRG1 AC132872.4-202ENST00000622924 2756 ntBASIC13.03□□□□□ -0.32
VPS25Q9BRG1 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
VPS25Q9BRG1 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
VPS25Q9BRG1 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
VPS25Q9BRG1 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
VPS25Q9BRG1 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC13.02□□□□□ -0.32
VPS25Q9BRG1 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC13.02□□□□□ -0.32
VPS25Q9BRG1 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
VPS25Q9BRG1 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.32
VPS25Q9BRG1 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
VPS25Q9BRG1 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.32
VPS25Q9BRG1 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.32
VPS25Q9BRG1 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
VPS25Q9BRG1 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC13.02□□□□□ -0.32
VPS25Q9BRG1 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
VPS25Q9BRG1 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
VPS25Q9BRG1 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.32
VPS25Q9BRG1 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
VPS25Q9BRG1 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
VPS25Q9BRG1 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC13.02□□□□□ -0.33
VPS25Q9BRG1 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
VPS25Q9BRG1 HES4-204ENST00000484667 667 ntTSL 3 BASIC13.02□□□□□ -0.33
VPS25Q9BRG1 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
VPS25Q9BRG1 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.33
VPS25Q9BRG1 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
VPS25Q9BRG1 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
VPS25Q9BRG1 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
VPS25Q9BRG1 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC13.02□□□□□ -0.33
VPS25Q9BRG1 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
VPS25Q9BRG1 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
VPS25Q9BRG1 PPP1R26P4-201ENST00000619065 3527 ntBASIC13.02□□□□□ -0.33
VPS25Q9BRG1 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC13.02□□□□□ -0.33
VPS25Q9BRG1 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
VPS25Q9BRG1 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC13.02□□□□□ -0.33
VPS25Q9BRG1 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
VPS25Q9BRG1 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
VPS25Q9BRG1 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC13.02□□□□□ -0.33
VPS25Q9BRG1 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC13.02□□□□□ -0.33
VPS25Q9BRG1 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC13.02□□□□□ -0.33
VPS25Q9BRG1 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
VPS25Q9BRG1 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
VPS25Q9BRG1 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
VPS25Q9BRG1 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
VPS25Q9BRG1 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
VPS25Q9BRG1 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC13.01□□□□□ -0.33
VPS25Q9BRG1 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
VPS25Q9BRG1 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC13.01□□□□□ -0.33
VPS25Q9BRG1 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
VPS25Q9BRG1 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC13.01□□□□□ -0.33
VPS25Q9BRG1 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
VPS25Q9BRG1 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
VPS25Q9BRG1 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
VPS25Q9BRG1 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
VPS25Q9BRG1 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC13.01□□□□□ -0.33
VPS25Q9BRG1 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms