Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 AC092647.4-201ENST00000457211 535 ntBASIC19.21■□□□□ 0.67
RPRD1AQ96P16 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RPRD1AQ96P16 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
RPRD1AQ96P16 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
RPRD1AQ96P16 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RPRD1AQ96P16 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RPRD1AQ96P16 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
RPRD1AQ96P16 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RPRD1AQ96P16 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
RPRD1AQ96P16 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.66
RPRD1AQ96P16 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC19.2■□□□□ 0.66
RPRD1AQ96P16 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RPRD1AQ96P16 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC19.2■□□□□ 0.66
RPRD1AQ96P16 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
RPRD1AQ96P16 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RPRD1AQ96P16 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RPRD1AQ96P16 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
RPRD1AQ96P16 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC19.2■□□□□ 0.66
RPRD1AQ96P16 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
RPRD1AQ96P16 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC19.2■□□□□ 0.66
RPRD1AQ96P16 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC19.2■□□□□ 0.66
RPRD1AQ96P16 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RPRD1AQ96P16 AC063952.2-201ENST00000498792 1227 ntBASIC19.2■□□□□ 0.66
RPRD1AQ96P16 AC022616.7-201ENST00000525383 220 ntBASIC19.2■□□□□ 0.66
RPRD1AQ96P16 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC19.2■□□□□ 0.66
RPRD1AQ96P16 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RPRD1AQ96P16 AL590326.2-201ENST00000625139 305 ntBASIC19.2■□□□□ 0.66
RPRD1AQ96P16 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
RPRD1AQ96P16 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RPRD1AQ96P16 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RPRD1AQ96P16 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RPRD1AQ96P16 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RPRD1AQ96P16 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RPRD1AQ96P16 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC19.2■□□□□ 0.66
RPRD1AQ96P16 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RPRD1AQ96P16 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RPRD1AQ96P16 SNAI3-AS1-205ENST00000568633 2096 ntBASIC19.2■□□□□ 0.66
RPRD1AQ96P16 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC19.2■□□□□ 0.66
RPRD1AQ96P16 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC19.19■□□□□ 0.66
RPRD1AQ96P16 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RPRD1AQ96P16 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC19.19■□□□□ 0.66
RPRD1AQ96P16 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RPRD1AQ96P16 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC19.19■□□□□ 0.66
RPRD1AQ96P16 KRT8P7-201ENST00000533003 1432 ntBASIC19.19■□□□□ 0.66
RPRD1AQ96P16 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RPRD1AQ96P16 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RPRD1AQ96P16 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC19.19■□□□□ 0.66
RPRD1AQ96P16 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RPRD1AQ96P16 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RPRD1AQ96P16 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC19.19■□□□□ 0.66
RPRD1AQ96P16 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RPRD1AQ96P16 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RPRD1AQ96P16 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC19.19■□□□□ 0.66
RPRD1AQ96P16 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC19.19■□□□□ 0.66
RPRD1AQ96P16 NME3-204ENST00000563498 920 ntTSL 2 BASIC19.19■□□□□ 0.66
RPRD1AQ96P16 LINC01238-205ENST00000567549 1107 ntBASIC19.19■□□□□ 0.66
RPRD1AQ96P16 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC19.19■□□□□ 0.66
RPRD1AQ96P16 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC19.19■□□□□ 0.66
RPRD1AQ96P16 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RPRD1AQ96P16 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
RPRD1AQ96P16 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC19.19■□□□□ 0.66
RPRD1AQ96P16 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
RPRD1AQ96P16 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RPRD1AQ96P16 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RPRD1AQ96P16 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC19.19■□□□□ 0.66
RPRD1AQ96P16 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC19.19■□□□□ 0.66
RPRD1AQ96P16 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RPRD1AQ96P16 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RPRD1AQ96P16 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
RPRD1AQ96P16 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RPRD1AQ96P16 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RPRD1AQ96P16 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
RPRD1AQ96P16 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
RPRD1AQ96P16 HOXB1-202ENST00000577092 1414 ntBASIC19.18■□□□□ 0.66
RPRD1AQ96P16 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RPRD1AQ96P16 COBL-210ENST00000632460 1941 ntTSL 5 BASIC19.18■□□□□ 0.66
RPRD1AQ96P16 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RPRD1AQ96P16 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC19.18■□□□□ 0.66
RPRD1AQ96P16 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
RPRD1AQ96P16 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RPRD1AQ96P16 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RPRD1AQ96P16 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
RPRD1AQ96P16 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RPRD1AQ96P16 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RPRD1AQ96P16 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RPRD1AQ96P16 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC19.18■□□□□ 0.66
RPRD1AQ96P16 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RPRD1AQ96P16 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RPRD1AQ96P16 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC19.18■□□□□ 0.66
RPRD1AQ96P16 LTBR-211ENST00000543190 785 ntTSL 3 BASIC19.18■□□□□ 0.66
RPRD1AQ96P16 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC19.18■□□□□ 0.66
RPRD1AQ96P16 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC19.18■□□□□ 0.66
RPRD1AQ96P16 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC19.18■□□□□ 0.66
RPRD1AQ96P16 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RPRD1AQ96P16 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
RPRD1AQ96P16 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC19.18■□□□□ 0.66
RPRD1AQ96P16 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RPRD1AQ96P16 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC19.18■□□□□ 0.66
RPRD1AQ96P16 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
RPRD1AQ96P16 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms