Protein–RNA interactions for Protein: Q96NT5

SLC46A1, Proton-coupled folate transporter, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A1Q96NT5 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SLC46A1Q96NT5 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC17.83■□□□□ 0.44
SLC46A1Q96NT5 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
SLC46A1Q96NT5 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC17.83■□□□□ 0.44
SLC46A1Q96NT5 AC007952.6-201ENST00000573168 2673 ntBASIC17.83■□□□□ 0.44
SLC46A1Q96NT5 AC003957.1-201ENST00000625108 2673 ntBASIC17.83■□□□□ 0.44
SLC46A1Q96NT5 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
SLC46A1Q96NT5 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SLC46A1Q96NT5 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
SLC46A1Q96NT5 AC005332.7-201ENST00000614046 2005 ntBASIC17.82■□□□□ 0.44
SLC46A1Q96NT5 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SLC46A1Q96NT5 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC17.82■□□□□ 0.44
SLC46A1Q96NT5 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC17.82■□□□□ 0.44
SLC46A1Q96NT5 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC17.82■□□□□ 0.44
SLC46A1Q96NT5 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SLC46A1Q96NT5 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SLC46A1Q96NT5 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SLC46A1Q96NT5 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
SLC46A1Q96NT5 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC17.82■□□□□ 0.44
SLC46A1Q96NT5 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SLC46A1Q96NT5 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SLC46A1Q96NT5 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SLC46A1Q96NT5 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
SLC46A1Q96NT5 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
SLC46A1Q96NT5 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC17.82■□□□□ 0.44
SLC46A1Q96NT5 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
SLC46A1Q96NT5 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC17.82■□□□□ 0.44
SLC46A1Q96NT5 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC17.82■□□□□ 0.44
SLC46A1Q96NT5 AP000867.3-201ENST00000524675 377 ntBASIC17.82■□□□□ 0.44
SLC46A1Q96NT5 PNN-202ENST00000553331 656 ntTSL 3 BASIC17.82■□□□□ 0.44
SLC46A1Q96NT5 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
SLC46A1Q96NT5 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
SLC46A1Q96NT5 GXYLT1P4-201ENST00000613576 1192 ntBASIC17.82■□□□□ 0.44
SLC46A1Q96NT5 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SLC46A1Q96NT5 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
SLC46A1Q96NT5 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
SLC46A1Q96NT5 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SLC46A1Q96NT5 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
SLC46A1Q96NT5 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC17.82■□□□□ 0.44
SLC46A1Q96NT5 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SLC46A1Q96NT5 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
SLC46A1Q96NT5 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SLC46A1Q96NT5 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
SLC46A1Q96NT5 AC116562.4-201ENST00000641316 2276 ntBASIC17.82■□□□□ 0.44
SLC46A1Q96NT5 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SLC46A1Q96NT5 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
SLC46A1Q96NT5 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SLC46A1Q96NT5 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC17.81■□□□□ 0.44
SLC46A1Q96NT5 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SLC46A1Q96NT5 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SLC46A1Q96NT5 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SLC46A1Q96NT5 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SLC46A1Q96NT5 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC17.81■□□□□ 0.44
SLC46A1Q96NT5 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC17.81■□□□□ 0.44
SLC46A1Q96NT5 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC17.81■□□□□ 0.44
SLC46A1Q96NT5 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC17.81■□□□□ 0.44
SLC46A1Q96NT5 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC17.81■□□□□ 0.44
SLC46A1Q96NT5 LINC00265-3P-201ENST00000447588 903 ntBASIC17.81■□□□□ 0.44
SLC46A1Q96NT5 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SLC46A1Q96NT5 CIB2-208ENST00000560618 804 ntTSL 2 BASIC17.81■□□□□ 0.44
SLC46A1Q96NT5 AC012615.1-201ENST00000565797 1299 ntBASIC17.81■□□□□ 0.44
SLC46A1Q96NT5 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC17.81■□□□□ 0.44
SLC46A1Q96NT5 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC17.81■□□□□ 0.44
SLC46A1Q96NT5 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
SLC46A1Q96NT5 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
SLC46A1Q96NT5 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SLC46A1Q96NT5 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
SLC46A1Q96NT5 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
SLC46A1Q96NT5 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC17.81■□□□□ 0.44
SLC46A1Q96NT5 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SLC46A1Q96NT5 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC17.81■□□□□ 0.44
SLC46A1Q96NT5 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
SLC46A1Q96NT5 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC17.8■□□□□ 0.44
SLC46A1Q96NT5 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC17.8■□□□□ 0.44
SLC46A1Q96NT5 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SLC46A1Q96NT5 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
SLC46A1Q96NT5 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
SLC46A1Q96NT5 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
SLC46A1Q96NT5 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SLC46A1Q96NT5 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SLC46A1Q96NT5 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC17.8■□□□□ 0.44
SLC46A1Q96NT5 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SLC46A1Q96NT5 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
SLC46A1Q96NT5 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
SLC46A1Q96NT5 RNF126P1-202ENST00000569893 925 ntBASIC17.8■□□□□ 0.44
SLC46A1Q96NT5 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
SLC46A1Q96NT5 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC17.8■□□□□ 0.44
SLC46A1Q96NT5 GPALPP1-207ENST00000611650 899 ntBASIC17.8■□□□□ 0.44
SLC46A1Q96NT5 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC17.8■□□□□ 0.44
SLC46A1Q96NT5 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
SLC46A1Q96NT5 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC17.8■□□□□ 0.44
SLC46A1Q96NT5 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
SLC46A1Q96NT5 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SLC46A1Q96NT5 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SLC46A1Q96NT5 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SLC46A1Q96NT5 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
SLC46A1Q96NT5 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC17.8■□□□□ 0.44
SLC46A1Q96NT5 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
SLC46A1Q96NT5 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SLC46A1Q96NT5 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 65.2 ms