Protein–RNA interactions for Protein: Q96NG5

ZNF558, Zinc finger protein 558, humanhuman

Predictions only

Length 402 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558Q96NG5 IGHV3-47-201ENST00000425060 335 ntBASIC19.79■□□□□ 0.76
ZNF558Q96NG5 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC19.79■□□□□ 0.76
ZNF558Q96NG5 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC19.79■□□□□ 0.76
ZNF558Q96NG5 RN7SL606P-201ENST00000472779 293 ntBASIC19.79■□□□□ 0.76
ZNF558Q96NG5 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC19.79■□□□□ 0.76
ZNF558Q96NG5 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
ZNF558Q96NG5 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ZNF558Q96NG5 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC19.79■□□□□ 0.76
ZNF558Q96NG5 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
ZNF558Q96NG5 AL353801.3-201ENST00000609898 542 ntBASIC19.79■□□□□ 0.76
ZNF558Q96NG5 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC19.79■□□□□ 0.76
ZNF558Q96NG5 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC19.79■□□□□ 0.76
ZNF558Q96NG5 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC19.79■□□□□ 0.76
ZNF558Q96NG5 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
ZNF558Q96NG5 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
ZNF558Q96NG5 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ZNF558Q96NG5 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
ZNF558Q96NG5 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ZNF558Q96NG5 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
ZNF558Q96NG5 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC19.78■□□□□ 0.76
ZNF558Q96NG5 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC19.78■□□□□ 0.76
ZNF558Q96NG5 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC19.78■□□□□ 0.76
ZNF558Q96NG5 Z98044.1-201ENST00000632503 1764 ntBASIC19.78■□□□□ 0.76
ZNF558Q96NG5 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.78■□□□□ 0.76
ZNF558Q96NG5 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
ZNF558Q96NG5 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
ZNF558Q96NG5 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
ZNF558Q96NG5 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ZNF558Q96NG5 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC19.78■□□□□ 0.76
ZNF558Q96NG5 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC19.78■□□□□ 0.76
ZNF558Q96NG5 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC19.78■□□□□ 0.76
ZNF558Q96NG5 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC19.78■□□□□ 0.76
ZNF558Q96NG5 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC19.78■□□□□ 0.76
ZNF558Q96NG5 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
ZNF558Q96NG5 AL353692.3-201ENST00000407031 1396 ntBASIC19.78■□□□□ 0.76
ZNF558Q96NG5 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
ZNF558Q96NG5 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ZNF558Q96NG5 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC19.78■□□□□ 0.76
ZNF558Q96NG5 KRT89P-201ENST00000620027 1478 ntBASIC19.78■□□□□ 0.76
ZNF558Q96NG5 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ZNF558Q96NG5 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ZNF558Q96NG5 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ZNF558Q96NG5 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
ZNF558Q96NG5 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.77■□□□□ 0.76
ZNF558Q96NG5 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
ZNF558Q96NG5 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
ZNF558Q96NG5 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
ZNF558Q96NG5 PCDHAC2-203ENST00000615316 3011 ntBASIC19.77■□□□□ 0.76
ZNF558Q96NG5 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC19.77■□□□□ 0.76
ZNF558Q96NG5 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
ZNF558Q96NG5 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC19.77■□□□□ 0.76
ZNF558Q96NG5 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
ZNF558Q96NG5 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
ZNF558Q96NG5 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
ZNF558Q96NG5 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC19.77■□□□□ 0.76
ZNF558Q96NG5 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC19.77■□□□□ 0.76
ZNF558Q96NG5 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC19.77■□□□□ 0.76
ZNF558Q96NG5 AP002469.2-201ENST00000531724 424 ntBASIC19.77■□□□□ 0.76
ZNF558Q96NG5 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
ZNF558Q96NG5 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
ZNF558Q96NG5 AL121912.1-201ENST00000603683 238 ntBASIC19.77■□□□□ 0.76
ZNF558Q96NG5 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
ZNF558Q96NG5 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC19.77■□□□□ 0.76
ZNF558Q96NG5 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC19.77■□□□□ 0.76
ZNF558Q96NG5 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
ZNF558Q96NG5 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC19.77■□□□□ 0.76
ZNF558Q96NG5 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
ZNF558Q96NG5 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ZNF558Q96NG5 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
ZNF558Q96NG5 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC19.76■□□□□ 0.75
ZNF558Q96NG5 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ZNF558Q96NG5 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
ZNF558Q96NG5 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ZNF558Q96NG5 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ZNF558Q96NG5 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ZNF558Q96NG5 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC19.76■□□□□ 0.75
ZNF558Q96NG5 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
ZNF558Q96NG5 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC19.76■□□□□ 0.75
ZNF558Q96NG5 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
ZNF558Q96NG5 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
ZNF558Q96NG5 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC19.76■□□□□ 0.75
ZNF558Q96NG5 KRT16P4-201ENST00000453883 522 ntBASIC19.76■□□□□ 0.75
ZNF558Q96NG5 FICD-205ENST00000552758 603 ntTSL 2 BASIC19.76■□□□□ 0.75
ZNF558Q96NG5 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC19.76■□□□□ 0.75
ZNF558Q96NG5 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ZNF558Q96NG5 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ZNF558Q96NG5 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ZNF558Q96NG5 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
ZNF558Q96NG5 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC19.76■□□□□ 0.75
ZNF558Q96NG5 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
ZNF558Q96NG5 NSUN5P1-202ENST00000421140 1535 ntBASIC19.76■□□□□ 0.75
ZNF558Q96NG5 NSUN5P2-203ENST00000457352 1529 ntBASIC19.76■□□□□ 0.75
ZNF558Q96NG5 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ZNF558Q96NG5 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC19.76■□□□□ 0.75
ZNF558Q96NG5 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
ZNF558Q96NG5 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
ZNF558Q96NG5 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
ZNF558Q96NG5 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
ZNF558Q96NG5 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC19.75■□□□□ 0.75
ZNF558Q96NG5 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms