Protein–RNA interactions for Protein: Q96M43

NBPF4, Neuroblastoma breakpoint family member 4, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF4Q96M43 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
NBPF4Q96M43 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
NBPF4Q96M43 MTMR9LP-203ENST00000426597 1545 ntBASIC24.55■■□□□ 1.52
NBPF4Q96M43 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
NBPF4Q96M43 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC24.54■■□□□ 1.52
NBPF4Q96M43 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC24.54■■□□□ 1.52
NBPF4Q96M43 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
NBPF4Q96M43 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
NBPF4Q96M43 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC24.54■■□□□ 1.52
NBPF4Q96M43 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC24.54■■□□□ 1.52
NBPF4Q96M43 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC24.54■■□□□ 1.52
NBPF4Q96M43 DFFB-203ENST00000341385 572 ntTSL 5 BASIC24.54■■□□□ 1.52
NBPF4Q96M43 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC24.54■■□□□ 1.52
NBPF4Q96M43 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
NBPF4Q96M43 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
NBPF4Q96M43 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC24.54■■□□□ 1.52
NBPF4Q96M43 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC24.54■■□□□ 1.52
NBPF4Q96M43 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC24.54■■□□□ 1.52
NBPF4Q96M43 ABR-204ENST00000543210 1049 ntTSL 2 BASIC24.54■■□□□ 1.52
NBPF4Q96M43 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC24.54■■□□□ 1.52
NBPF4Q96M43 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC24.54■■□□□ 1.52
NBPF4Q96M43 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
NBPF4Q96M43 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
NBPF4Q96M43 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC24.54■■□□□ 1.52
NBPF4Q96M43 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC24.54■■□□□ 1.52
NBPF4Q96M43 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
NBPF4Q96M43 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC24.54■■□□□ 1.52
NBPF4Q96M43 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC24.54■■□□□ 1.52
NBPF4Q96M43 AL353692.3-201ENST00000407031 1396 ntBASIC24.54■■□□□ 1.52
NBPF4Q96M43 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
NBPF4Q96M43 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC24.53■■□□□ 1.52
NBPF4Q96M43 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
NBPF4Q96M43 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
NBPF4Q96M43 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
NBPF4Q96M43 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC24.53■■□□□ 1.52
NBPF4Q96M43 AC106795.1-205ENST00000512851 1056 ntBASIC24.53■■□□□ 1.52
NBPF4Q96M43 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
NBPF4Q96M43 PPOX-214ENST00000535223 664 ntTSL 3 BASIC24.53■■□□□ 1.52
NBPF4Q96M43 Z69720.1-201ENST00000601483 472 ntBASIC24.53■■□□□ 1.52
NBPF4Q96M43 AL353801.3-201ENST00000609898 542 ntBASIC24.53■■□□□ 1.52
NBPF4Q96M43 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC24.53■■□□□ 1.52
NBPF4Q96M43 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC24.53■■□□□ 1.52
NBPF4Q96M43 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC24.53■■□□□ 1.52
NBPF4Q96M43 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC24.53■■□□□ 1.52
NBPF4Q96M43 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC24.53■■□□□ 1.52
NBPF4Q96M43 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
NBPF4Q96M43 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
NBPF4Q96M43 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC24.52■■□□□ 1.52
NBPF4Q96M43 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
NBPF4Q96M43 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
NBPF4Q96M43 AC007952.6-201ENST00000573168 2673 ntBASIC24.52■■□□□ 1.52
NBPF4Q96M43 AC003957.1-201ENST00000625108 2673 ntBASIC24.52■■□□□ 1.52
NBPF4Q96M43 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
NBPF4Q96M43 AC093484.2-201ENST00000580996 2166 ntBASIC24.52■■□□□ 1.52
NBPF4Q96M43 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC24.52■■□□□ 1.52
NBPF4Q96M43 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
NBPF4Q96M43 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
NBPF4Q96M43 MRPL3P1-201ENST00000400109 1033 ntBASIC24.52■■□□□ 1.52
NBPF4Q96M43 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC24.52■■□□□ 1.52
NBPF4Q96M43 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
NBPF4Q96M43 FICD-205ENST00000552758 603 ntTSL 2 BASIC24.52■■□□□ 1.52
NBPF4Q96M43 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
NBPF4Q96M43 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC24.52■■□□□ 1.52
NBPF4Q96M43 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC24.52■■□□□ 1.52
NBPF4Q96M43 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC24.52■■□□□ 1.52
NBPF4Q96M43 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC24.51■■□□□ 1.51
NBPF4Q96M43 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC24.51■■□□□ 1.51
NBPF4Q96M43 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC24.51■■□□□ 1.51
NBPF4Q96M43 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
NBPF4Q96M43 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
NBPF4Q96M43 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
NBPF4Q96M43 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC24.51■■□□□ 1.51
NBPF4Q96M43 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC24.51■■□□□ 1.51
NBPF4Q96M43 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
NBPF4Q96M43 GUSBP12-201ENST00000513727 720 ntBASIC24.51■■□□□ 1.51
NBPF4Q96M43 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC24.51■■□□□ 1.51
NBPF4Q96M43 TPM1-218ENST00000559281 851 ntTSL 5 BASIC24.51■■□□□ 1.51
NBPF4Q96M43 CALM3-211ENST00000598871 561 ntTSL 4 BASIC24.51■■□□□ 1.51
NBPF4Q96M43 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
NBPF4Q96M43 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
NBPF4Q96M43 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
NBPF4Q96M43 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC24.51■■□□□ 1.51
NBPF4Q96M43 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
NBPF4Q96M43 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC24.51■■□□□ 1.51
NBPF4Q96M43 KRT89P-201ENST00000620027 1478 ntBASIC24.51■■□□□ 1.51
NBPF4Q96M43 NSUN5P1-202ENST00000421140 1535 ntBASIC24.51■■□□□ 1.51
NBPF4Q96M43 NSUN5P2-203ENST00000457352 1529 ntBASIC24.51■■□□□ 1.51
NBPF4Q96M43 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC24.5■■□□□ 1.51
NBPF4Q96M43 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
NBPF4Q96M43 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
NBPF4Q96M43 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC24.5■■□□□ 1.51
NBPF4Q96M43 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
NBPF4Q96M43 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
NBPF4Q96M43 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC24.5■■□□□ 1.51
NBPF4Q96M43 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC24.5■■□□□ 1.51
NBPF4Q96M43 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC24.5■■□□□ 1.51
NBPF4Q96M43 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC24.5■■□□□ 1.51
NBPF4Q96M43 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC24.5■■□□□ 1.51
NBPF4Q96M43 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
NBPF4Q96M43 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC24.5■■□□□ 1.51
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms