Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
IFT43Q96FT9 TERF1P1-201ENST00000311003 1181 ntBASIC19.21■□□□□ 0.67
IFT43Q96FT9 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
IFT43Q96FT9 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
IFT43Q96FT9 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
IFT43Q96FT9 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC19.21■□□□□ 0.67
IFT43Q96FT9 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC19.21■□□□□ 0.67
IFT43Q96FT9 AC097488.1-201ENST00000507834 756 ntBASIC19.21■□□□□ 0.67
IFT43Q96FT9 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC19.21■□□□□ 0.67
IFT43Q96FT9 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
IFT43Q96FT9 AL049597.2-201ENST00000565575 961 ntBASIC19.21■□□□□ 0.67
IFT43Q96FT9 SLC25A1P4-201ENST00000567977 778 ntBASIC19.21■□□□□ 0.67
IFT43Q96FT9 AP000692.2-201ENST00000608391 879 ntBASIC19.21■□□□□ 0.67
IFT43Q96FT9 AC073508.3-201ENST00000619697 1419 ntBASIC19.21■□□□□ 0.67
IFT43Q96FT9 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
IFT43Q96FT9 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC19.21■□□□□ 0.67
IFT43Q96FT9 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
IFT43Q96FT9 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
IFT43Q96FT9 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC19.21■□□□□ 0.67
IFT43Q96FT9 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
IFT43Q96FT9 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC19.21■□□□□ 0.67
IFT43Q96FT9 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
IFT43Q96FT9 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
IFT43Q96FT9 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
IFT43Q96FT9 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
IFT43Q96FT9 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
IFT43Q96FT9 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
IFT43Q96FT9 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
IFT43Q96FT9 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
IFT43Q96FT9 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
IFT43Q96FT9 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC19.2■□□□□ 0.66
IFT43Q96FT9 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC19.2■□□□□ 0.66
IFT43Q96FT9 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
IFT43Q96FT9 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
IFT43Q96FT9 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC19.2■□□□□ 0.66
IFT43Q96FT9 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC19.2■□□□□ 0.66
IFT43Q96FT9 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
IFT43Q96FT9 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC19.2■□□□□ 0.66
IFT43Q96FT9 CKBP1-201ENST00000565489 1086 ntBASIC19.2■□□□□ 0.66
IFT43Q96FT9 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
IFT43Q96FT9 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC19.2■□□□□ 0.66
IFT43Q96FT9 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC19.2■□□□□ 0.66
IFT43Q96FT9 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
IFT43Q96FT9 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC19.2■□□□□ 0.66
IFT43Q96FT9 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC19.2■□□□□ 0.66
IFT43Q96FT9 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC19.2■□□□□ 0.66
IFT43Q96FT9 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
IFT43Q96FT9 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
IFT43Q96FT9 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
IFT43Q96FT9 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
IFT43Q96FT9 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
IFT43Q96FT9 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC19.2■□□□□ 0.66
IFT43Q96FT9 AP000997.3-201ENST00000623333 2250 ntBASIC19.2■□□□□ 0.66
IFT43Q96FT9 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC19.19■□□□□ 0.66
IFT43Q96FT9 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
IFT43Q96FT9 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
IFT43Q96FT9 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC19.19■□□□□ 0.66
IFT43Q96FT9 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
IFT43Q96FT9 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
IFT43Q96FT9 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
IFT43Q96FT9 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
IFT43Q96FT9 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
IFT43Q96FT9 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
IFT43Q96FT9 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
IFT43Q96FT9 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC19.19■□□□□ 0.66
IFT43Q96FT9 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC19.19■□□□□ 0.66
IFT43Q96FT9 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
IFT43Q96FT9 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
IFT43Q96FT9 AC128688.1-201ENST00000487626 519 ntBASIC19.19■□□□□ 0.66
IFT43Q96FT9 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC19.19■□□□□ 0.66
IFT43Q96FT9 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC19.19■□□□□ 0.66
IFT43Q96FT9 AL445228.2-201ENST00000605589 952 ntBASIC19.19■□□□□ 0.66
IFT43Q96FT9 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
IFT43Q96FT9 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC19.19■□□□□ 0.66
IFT43Q96FT9 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
IFT43Q96FT9 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
IFT43Q96FT9 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
IFT43Q96FT9 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
IFT43Q96FT9 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
IFT43Q96FT9 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
IFT43Q96FT9 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC19.19■□□□□ 0.66
IFT43Q96FT9 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
IFT43Q96FT9 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC19.19■□□□□ 0.66
IFT43Q96FT9 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC19.19■□□□□ 0.66
IFT43Q96FT9 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
IFT43Q96FT9 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
IFT43Q96FT9 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
IFT43Q96FT9 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
IFT43Q96FT9 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
IFT43Q96FT9 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
IFT43Q96FT9 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
IFT43Q96FT9 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
IFT43Q96FT9 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
IFT43Q96FT9 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
IFT43Q96FT9 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
IFT43Q96FT9 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
IFT43Q96FT9 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
IFT43Q96FT9 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC19.18■□□□□ 0.66
IFT43Q96FT9 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
IFT43Q96FT9 USP39-202ENST00000409025 1946 ntTSL 5 BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms