Protein–RNA interactions for Protein: Q96FL8

SLC47A1, Multidrug and toxin extrusion protein 1, humanhuman

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC47A1Q96FL8 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SLC47A1Q96FL8 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SLC47A1Q96FL8 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SLC47A1Q96FL8 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC17.61■□□□□ 0.41
SLC47A1Q96FL8 OR6D1P-202ENST00000641007 5290 ntBASIC17.61■□□□□ 0.41
SLC47A1Q96FL8 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
SLC47A1Q96FL8 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
SLC47A1Q96FL8 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
SLC47A1Q96FL8 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
SLC47A1Q96FL8 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SLC47A1Q96FL8 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SLC47A1Q96FL8 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SLC47A1Q96FL8 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
SLC47A1Q96FL8 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SLC47A1Q96FL8 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SLC47A1Q96FL8 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SLC47A1Q96FL8 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC17.61■□□□□ 0.41
SLC47A1Q96FL8 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SLC47A1Q96FL8 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
SLC47A1Q96FL8 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC17.61■□□□□ 0.41
SLC47A1Q96FL8 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
SLC47A1Q96FL8 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SLC47A1Q96FL8 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC17.6■□□□□ 0.41
SLC47A1Q96FL8 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
SLC47A1Q96FL8 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
SLC47A1Q96FL8 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SLC47A1Q96FL8 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SLC47A1Q96FL8 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SLC47A1Q96FL8 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SLC47A1Q96FL8 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
SLC47A1Q96FL8 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SLC47A1Q96FL8 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
SLC47A1Q96FL8 KRT17P3-201ENST00000420566 1262 ntBASIC17.6■□□□□ 0.41
SLC47A1Q96FL8 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC17.6■□□□□ 0.41
SLC47A1Q96FL8 AP003097.1-201ENST00000530657 1135 ntBASIC17.6■□□□□ 0.41
SLC47A1Q96FL8 RHOD-202ENST00000532559 538 ntTSL 3 BASIC17.6■□□□□ 0.41
SLC47A1Q96FL8 EMC9-206ENST00000560403 872 ntTSL 2 BASIC17.6■□□□□ 0.41
SLC47A1Q96FL8 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SLC47A1Q96FL8 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC17.6■□□□□ 0.41
SLC47A1Q96FL8 AC008403.3-201ENST00000598924 454 ntBASIC17.6■□□□□ 0.41
SLC47A1Q96FL8 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
SLC47A1Q96FL8 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC17.6■□□□□ 0.41
SLC47A1Q96FL8 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SLC47A1Q96FL8 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
SLC47A1Q96FL8 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC17.6■□□□□ 0.41
SLC47A1Q96FL8 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SLC47A1Q96FL8 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SLC47A1Q96FL8 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC17.6■□□□□ 0.41
SLC47A1Q96FL8 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
SLC47A1Q96FL8 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
SLC47A1Q96FL8 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SLC47A1Q96FL8 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SLC47A1Q96FL8 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
SLC47A1Q96FL8 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC17.59■□□□□ 0.41
SLC47A1Q96FL8 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SLC47A1Q96FL8 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
SLC47A1Q96FL8 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SLC47A1Q96FL8 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SLC47A1Q96FL8 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SLC47A1Q96FL8 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
SLC47A1Q96FL8 HEIH-201ENST00000623091 1652 ntBASIC17.59■□□□□ 0.41
SLC47A1Q96FL8 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SLC47A1Q96FL8 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC17.59■□□□□ 0.41
SLC47A1Q96FL8 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
SLC47A1Q96FL8 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
SLC47A1Q96FL8 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SLC47A1Q96FL8 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SLC47A1Q96FL8 TSPY23P-201ENST00000440136 739 ntBASIC17.59■□□□□ 0.41
SLC47A1Q96FL8 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC17.59■□□□□ 0.41
SLC47A1Q96FL8 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SLC47A1Q96FL8 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC17.59■□□□□ 0.41
SLC47A1Q96FL8 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
SLC47A1Q96FL8 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC17.59■□□□□ 0.41
SLC47A1Q96FL8 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SLC47A1Q96FL8 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC17.59■□□□□ 0.41
SLC47A1Q96FL8 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
SLC47A1Q96FL8 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SLC47A1Q96FL8 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SLC47A1Q96FL8 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
SLC47A1Q96FL8 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
SLC47A1Q96FL8 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SLC47A1Q96FL8 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
SLC47A1Q96FL8 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
SLC47A1Q96FL8 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SLC47A1Q96FL8 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SLC47A1Q96FL8 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC17.59■□□□□ 0.41
SLC47A1Q96FL8 ESPNP-201ENST00000270691 2015 ntBASIC17.59■□□□□ 0.41
SLC47A1Q96FL8 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SLC47A1Q96FL8 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC17.58■□□□□ 0.41
SLC47A1Q96FL8 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC17.58■□□□□ 0.41
SLC47A1Q96FL8 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.41
SLC47A1Q96FL8 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC17.58■□□□□ 0.41
SLC47A1Q96FL8 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
SLC47A1Q96FL8 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
SLC47A1Q96FL8 NBPF21P-201ENST00000425093 1451 ntBASIC17.58■□□□□ 0.41
SLC47A1Q96FL8 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SLC47A1Q96FL8 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC17.58■□□□□ 0.4
SLC47A1Q96FL8 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SLC47A1Q96FL8 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
SLC47A1Q96FL8 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms