Protein–RNA interactions for Protein: Q969T4

UBE2E3, Ubiquitin-conjugating enzyme E2 E3, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3Q969T4 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
UBE2E3Q969T4 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
UBE2E3Q969T4 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
UBE2E3Q969T4 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
UBE2E3Q969T4 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
UBE2E3Q969T4 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
UBE2E3Q969T4 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
UBE2E3Q969T4 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC17.94■□□□□ 0.46
UBE2E3Q969T4 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
UBE2E3Q969T4 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
UBE2E3Q969T4 AC090164.3-201ENST00000610780 2143 ntBASIC17.93■□□□□ 0.46
UBE2E3Q969T4 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC17.93■□□□□ 0.46
UBE2E3Q969T4 AC073592.3-201ENST00000625118 1834 ntBASIC17.93■□□□□ 0.46
UBE2E3Q969T4 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC17.93■□□□□ 0.46
UBE2E3Q969T4 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC17.93■□□□□ 0.46
UBE2E3Q969T4 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
UBE2E3Q969T4 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
UBE2E3Q969T4 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
UBE2E3Q969T4 AP000593.1-201ENST00000393668 712 ntBASIC17.93■□□□□ 0.46
UBE2E3Q969T4 BX088651.1-201ENST00000540551 451 ntBASIC17.93■□□□□ 0.46
UBE2E3Q969T4 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
UBE2E3Q969T4 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC17.93■□□□□ 0.46
UBE2E3Q969T4 MIR3180-5-201ENST00000583743 153 ntBASIC17.93■□□□□ 0.46
UBE2E3Q969T4 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
UBE2E3Q969T4 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC17.93■□□□□ 0.46
UBE2E3Q969T4 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC17.93■□□□□ 0.46
UBE2E3Q969T4 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
UBE2E3Q969T4 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
UBE2E3Q969T4 USP49-202ENST00000373010 2446 ntTSL 5 BASIC17.93■□□□□ 0.46
UBE2E3Q969T4 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
UBE2E3Q969T4 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
UBE2E3Q969T4 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC17.93■□□□□ 0.46
UBE2E3Q969T4 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
UBE2E3Q969T4 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
UBE2E3Q969T4 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
UBE2E3Q969T4 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
UBE2E3Q969T4 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
UBE2E3Q969T4 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
UBE2E3Q969T4 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
UBE2E3Q969T4 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC17.92■□□□□ 0.46
UBE2E3Q969T4 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
UBE2E3Q969T4 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
UBE2E3Q969T4 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
UBE2E3Q969T4 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
UBE2E3Q969T4 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
UBE2E3Q969T4 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
UBE2E3Q969T4 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC17.92■□□□□ 0.46
UBE2E3Q969T4 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
UBE2E3Q969T4 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC17.92■□□□□ 0.46
UBE2E3Q969T4 AC034236.2-201ENST00000606662 1610 ntBASIC17.92■□□□□ 0.46
UBE2E3Q969T4 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC17.92■□□□□ 0.46
UBE2E3Q969T4 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC17.92■□□□□ 0.46
UBE2E3Q969T4 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC17.92■□□□□ 0.46
UBE2E3Q969T4 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC17.92■□□□□ 0.46
UBE2E3Q969T4 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
UBE2E3Q969T4 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC17.92■□□□□ 0.46
UBE2E3Q969T4 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
UBE2E3Q969T4 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
UBE2E3Q969T4 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
UBE2E3Q969T4 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
UBE2E3Q969T4 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
UBE2E3Q969T4 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC17.92■□□□□ 0.46
UBE2E3Q969T4 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
UBE2E3Q969T4 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
UBE2E3Q969T4 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
UBE2E3Q969T4 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
UBE2E3Q969T4 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
UBE2E3Q969T4 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
UBE2E3Q969T4 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
UBE2E3Q969T4 HTR7P1-202ENST00000624664 4411 ntBASIC17.91■□□□□ 0.46
UBE2E3Q969T4 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
UBE2E3Q969T4 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC17.91■□□□□ 0.46
UBE2E3Q969T4 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
UBE2E3Q969T4 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
UBE2E3Q969T4 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
UBE2E3Q969T4 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
UBE2E3Q969T4 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
UBE2E3Q969T4 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
UBE2E3Q969T4 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC17.91■□□□□ 0.46
UBE2E3Q969T4 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
UBE2E3Q969T4 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC17.91■□□□□ 0.46
UBE2E3Q969T4 PRR31-201ENST00000371629 978 ntTSL 2 BASIC17.91■□□□□ 0.46
UBE2E3Q969T4 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
UBE2E3Q969T4 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
UBE2E3Q969T4 AL390955.1-201ENST00000428694 934 ntBASIC17.91■□□□□ 0.46
UBE2E3Q969T4 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC17.91■□□□□ 0.46
UBE2E3Q969T4 AC128688.1-201ENST00000487626 519 ntBASIC17.91■□□□□ 0.46
UBE2E3Q969T4 AC093827.2-201ENST00000512654 315 ntBASIC17.91■□□□□ 0.46
UBE2E3Q969T4 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC17.91■□□□□ 0.46
UBE2E3Q969T4 EGLN1P1-201ENST00000531623 762 ntBASIC17.91■□□□□ 0.46
UBE2E3Q969T4 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC17.91■□□□□ 0.46
UBE2E3Q969T4 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
UBE2E3Q969T4 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
UBE2E3Q969T4 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC17.91■□□□□ 0.46
UBE2E3Q969T4 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC17.91■□□□□ 0.46
UBE2E3Q969T4 AC010653.2-201ENST00000623505 997 ntBASIC17.91■□□□□ 0.46
UBE2E3Q969T4 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
UBE2E3Q969T4 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
UBE2E3Q969T4 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC17.91■□□□□ 0.46
UBE2E3Q969T4 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms