Protein–RNA interactions for Protein: Q93050

ATP6V0A1, V-type proton ATPase 116 kDa subunit a isoform 1, humanhuman

Predictions only

Length 837 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1Q93050 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
ATP6V0A1Q93050 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ATP6V0A1Q93050 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ATP6V0A1Q93050 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ATP6V0A1Q93050 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ATP6V0A1Q93050 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ATP6V0A1Q93050 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ATP6V0A1Q93050 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ATP6V0A1Q93050 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC20.86■□□□□ 0.93
ATP6V0A1Q93050 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ATP6V0A1Q93050 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ATP6V0A1Q93050 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC20.86■□□□□ 0.93
ATP6V0A1Q93050 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC20.86■□□□□ 0.93
ATP6V0A1Q93050 AL450487.1-201ENST00000426799 995 ntBASIC20.86■□□□□ 0.93
ATP6V0A1Q93050 KRT18P23-201ENST00000435622 1283 ntBASIC20.86■□□□□ 0.93
ATP6V0A1Q93050 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC20.86■□□□□ 0.93
ATP6V0A1Q93050 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC20.86■□□□□ 0.93
ATP6V0A1Q93050 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC20.86■□□□□ 0.93
ATP6V0A1Q93050 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
ATP6V0A1Q93050 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC20.86■□□□□ 0.93
ATP6V0A1Q93050 BCL10-202ENST00000620248 774 ntTSL 5 BASIC20.86■□□□□ 0.93
ATP6V0A1Q93050 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
ATP6V0A1Q93050 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
ATP6V0A1Q93050 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
ATP6V0A1Q93050 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC20.86■□□□□ 0.93
ATP6V0A1Q93050 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC20.86■□□□□ 0.93
ATP6V0A1Q93050 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
ATP6V0A1Q93050 USP39-202ENST00000409025 1946 ntTSL 5 BASIC20.86■□□□□ 0.93
ATP6V0A1Q93050 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ATP6V0A1Q93050 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ATP6V0A1Q93050 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ATP6V0A1Q93050 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
ATP6V0A1Q93050 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
ATP6V0A1Q93050 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
ATP6V0A1Q93050 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
ATP6V0A1Q93050 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC20.85■□□□□ 0.93
ATP6V0A1Q93050 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ATP6V0A1Q93050 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC20.85■□□□□ 0.93
ATP6V0A1Q93050 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ATP6V0A1Q93050 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC20.85■□□□□ 0.93
ATP6V0A1Q93050 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ATP6V0A1Q93050 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
ATP6V0A1Q93050 ATP5G2P1-201ENST00000433580 426 ntBASIC20.85■□□□□ 0.93
ATP6V0A1Q93050 SEC1P-202ENST00000473944 940 ntBASIC20.85■□□□□ 0.93
ATP6V0A1Q93050 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC20.85■□□□□ 0.93
ATP6V0A1Q93050 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
ATP6V0A1Q93050 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
ATP6V0A1Q93050 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ATP6V0A1Q93050 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ATP6V0A1Q93050 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
ATP6V0A1Q93050 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
ATP6V0A1Q93050 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
ATP6V0A1Q93050 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ATP6V0A1Q93050 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
ATP6V0A1Q93050 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
ATP6V0A1Q93050 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC20.85■□□□□ 0.93
ATP6V0A1Q93050 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
ATP6V0A1Q93050 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ATP6V0A1Q93050 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ATP6V0A1Q93050 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
ATP6V0A1Q93050 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
ATP6V0A1Q93050 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
ATP6V0A1Q93050 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
ATP6V0A1Q93050 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ATP6V0A1Q93050 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ATP6V0A1Q93050 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
ATP6V0A1Q93050 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ATP6V0A1Q93050 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
ATP6V0A1Q93050 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ATP6V0A1Q93050 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC20.84■□□□□ 0.93
ATP6V0A1Q93050 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC20.84■□□□□ 0.93
ATP6V0A1Q93050 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ATP6V0A1Q93050 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ATP6V0A1Q93050 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
ATP6V0A1Q93050 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
ATP6V0A1Q93050 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
ATP6V0A1Q93050 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
ATP6V0A1Q93050 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
ATP6V0A1Q93050 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC20.84■□□□□ 0.93
ATP6V0A1Q93050 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ATP6V0A1Q93050 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC20.83■□□□□ 0.93
ATP6V0A1Q93050 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
ATP6V0A1Q93050 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC20.83■□□□□ 0.93
ATP6V0A1Q93050 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
ATP6V0A1Q93050 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC20.83■□□□□ 0.93
ATP6V0A1Q93050 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC20.83■□□□□ 0.93
ATP6V0A1Q93050 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
ATP6V0A1Q93050 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
ATP6V0A1Q93050 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
ATP6V0A1Q93050 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC20.83■□□□□ 0.93
ATP6V0A1Q93050 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
ATP6V0A1Q93050 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
ATP6V0A1Q93050 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
ATP6V0A1Q93050 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
ATP6V0A1Q93050 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
ATP6V0A1Q93050 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC20.83■□□□□ 0.92
ATP6V0A1Q93050 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC20.83■□□□□ 0.92
ATP6V0A1Q93050 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC20.83■□□□□ 0.92
ATP6V0A1Q93050 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC20.83■□□□□ 0.92
ATP6V0A1Q93050 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC20.83■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms