Protein–RNA interactions for Protein: Q92541

RTF1, RNA polymerase-associated protein RTF1 homolog, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1Q92541 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC24.31■■□□□ 1.48
RTF1Q92541 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
RTF1Q92541 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
RTF1Q92541 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC24.31■■□□□ 1.48
RTF1Q92541 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC24.31■■□□□ 1.48
RTF1Q92541 USF2-205ENST00000594064 1179 ntTSL 2 BASIC24.31■■□□□ 1.48
RTF1Q92541 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
RTF1Q92541 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC24.31■■□□□ 1.48
RTF1Q92541 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC24.31■■□□□ 1.48
RTF1Q92541 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC24.31■■□□□ 1.48
RTF1Q92541 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
RTF1Q92541 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
RTF1Q92541 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
RTF1Q92541 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
RTF1Q92541 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
RTF1Q92541 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
RTF1Q92541 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
RTF1Q92541 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC24.3■■□□□ 1.48
RTF1Q92541 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC24.3■■□□□ 1.48
RTF1Q92541 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC24.3■■□□□ 1.48
RTF1Q92541 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC24.3■■□□□ 1.48
RTF1Q92541 MIR3180-4-201ENST00000582223 153 ntBASIC24.3■■□□□ 1.48
RTF1Q92541 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC24.3■■□□□ 1.48
RTF1Q92541 SPEG-225ENST00000617028 815 ntTSL 5 BASIC24.3■■□□□ 1.48
RTF1Q92541 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
RTF1Q92541 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC24.3■■□□□ 1.48
RTF1Q92541 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC24.3■■□□□ 1.48
RTF1Q92541 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC24.3■■□□□ 1.48
RTF1Q92541 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC24.3■■□□□ 1.48
RTF1Q92541 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
RTF1Q92541 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
RTF1Q92541 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
RTF1Q92541 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC24.3■■□□□ 1.48
RTF1Q92541 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC24.29■■□□□ 1.48
RTF1Q92541 USP39-202ENST00000409025 1946 ntTSL 5 BASIC24.29■■□□□ 1.48
RTF1Q92541 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
RTF1Q92541 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC24.29■■□□□ 1.48
RTF1Q92541 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC24.29■■□□□ 1.48
RTF1Q92541 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC24.29■■□□□ 1.48
RTF1Q92541 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC24.29■■□□□ 1.48
RTF1Q92541 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
RTF1Q92541 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
RTF1Q92541 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC24.29■■□□□ 1.48
RTF1Q92541 CNP-204ENST00000472031 1019 ntTSL 2 BASIC24.29■■□□□ 1.48
RTF1Q92541 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
RTF1Q92541 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC24.29■■□□□ 1.48
RTF1Q92541 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC24.29■■□□□ 1.48
RTF1Q92541 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC24.29■■□□□ 1.48
RTF1Q92541 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
RTF1Q92541 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC24.29■■□□□ 1.48
RTF1Q92541 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC24.29■■□□□ 1.48
RTF1Q92541 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
RTF1Q92541 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC24.29■■□□□ 1.48
RTF1Q92541 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC24.28■■□□□ 1.48
RTF1Q92541 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC24.28■■□□□ 1.48
RTF1Q92541 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
RTF1Q92541 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC24.28■■□□□ 1.48
RTF1Q92541 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
RTF1Q92541 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC24.28■■□□□ 1.48
RTF1Q92541 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC24.28■■□□□ 1.48
RTF1Q92541 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC24.28■■□□□ 1.48
RTF1Q92541 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
RTF1Q92541 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC24.28■■□□□ 1.48
RTF1Q92541 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC24.28■■□□□ 1.48
RTF1Q92541 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC24.28■■□□□ 1.48
RTF1Q92541 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC24.28■■□□□ 1.48
RTF1Q92541 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC24.28■■□□□ 1.48
RTF1Q92541 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC24.28■■□□□ 1.48
RTF1Q92541 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC24.28■■□□□ 1.48
RTF1Q92541 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC24.28■■□□□ 1.48
RTF1Q92541 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
RTF1Q92541 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
RTF1Q92541 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
RTF1Q92541 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC24.28■■□□□ 1.48
RTF1Q92541 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC24.28■■□□□ 1.48
RTF1Q92541 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC24.27■■□□□ 1.48
RTF1Q92541 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
RTF1Q92541 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
RTF1Q92541 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
RTF1Q92541 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
RTF1Q92541 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
RTF1Q92541 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
RTF1Q92541 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC24.27■■□□□ 1.48
RTF1Q92541 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
RTF1Q92541 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC24.27■■□□□ 1.48
RTF1Q92541 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC24.27■■□□□ 1.48
RTF1Q92541 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC24.27■■□□□ 1.48
RTF1Q92541 AC011498.5-201ENST00000592027 486 ntBASIC24.27■■□□□ 1.48
RTF1Q92541 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
RTF1Q92541 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
RTF1Q92541 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC24.27■■□□□ 1.48
RTF1Q92541 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC24.27■■□□□ 1.48
RTF1Q92541 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
RTF1Q92541 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
RTF1Q92541 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
RTF1Q92541 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
RTF1Q92541 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC24.27■■□□□ 1.48
RTF1Q92541 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
RTF1Q92541 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
RTF1Q92541 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC24.26■■□□□ 1.47
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms