Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
SLC44A1Q8WWI5 AC131212.4-201ENST00000623606 975 ntBASIC18.72■□□□□ 0.59
SLC44A1Q8WWI5 AL023875.1-201ENST00000640777 796 ntBASIC18.72■□□□□ 0.59
SLC44A1Q8WWI5 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SLC44A1Q8WWI5 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SLC44A1Q8WWI5 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SLC44A1Q8WWI5 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
SLC44A1Q8WWI5 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC18.72■□□□□ 0.59
SLC44A1Q8WWI5 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
SLC44A1Q8WWI5 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
SLC44A1Q8WWI5 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SLC44A1Q8WWI5 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
SLC44A1Q8WWI5 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
SLC44A1Q8WWI5 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SLC44A1Q8WWI5 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SLC44A1Q8WWI5 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC18.71■□□□□ 0.59
SLC44A1Q8WWI5 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC18.71■□□□□ 0.59
SLC44A1Q8WWI5 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SLC44A1Q8WWI5 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SLC44A1Q8WWI5 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SLC44A1Q8WWI5 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC18.71■□□□□ 0.59
SLC44A1Q8WWI5 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC18.71■□□□□ 0.59
SLC44A1Q8WWI5 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SLC44A1Q8WWI5 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SLC44A1Q8WWI5 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC18.71■□□□□ 0.59
SLC44A1Q8WWI5 KRASP1-201ENST00000407852 552 ntBASIC18.71■□□□□ 0.59
SLC44A1Q8WWI5 DERL1-203ENST00000419562 918 ntTSL 2 BASIC18.71■□□□□ 0.59
SLC44A1Q8WWI5 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SLC44A1Q8WWI5 SLC25A6P5-201ENST00000435663 894 ntBASIC18.71■□□□□ 0.59
SLC44A1Q8WWI5 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC18.71■□□□□ 0.59
SLC44A1Q8WWI5 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC18.71■□□□□ 0.59
SLC44A1Q8WWI5 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SLC44A1Q8WWI5 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
SLC44A1Q8WWI5 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC18.71■□□□□ 0.59
SLC44A1Q8WWI5 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC18.71■□□□□ 0.59
SLC44A1Q8WWI5 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC18.71■□□□□ 0.59
SLC44A1Q8WWI5 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SLC44A1Q8WWI5 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC18.71■□□□□ 0.59
SLC44A1Q8WWI5 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC18.71■□□□□ 0.58
SLC44A1Q8WWI5 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SLC44A1Q8WWI5 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC18.7■□□□□ 0.58
SLC44A1Q8WWI5 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
SLC44A1Q8WWI5 AC138028.4-201ENST00000564984 1845 ntBASIC18.7■□□□□ 0.58
SLC44A1Q8WWI5 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC18.7■□□□□ 0.58
SLC44A1Q8WWI5 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SLC44A1Q8WWI5 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SLC44A1Q8WWI5 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SLC44A1Q8WWI5 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
SLC44A1Q8WWI5 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SLC44A1Q8WWI5 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SLC44A1Q8WWI5 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
SLC44A1Q8WWI5 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SLC44A1Q8WWI5 POR-209ENST00000439269 1858 ntTSL 2 BASIC18.7■□□□□ 0.58
SLC44A1Q8WWI5 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC18.7■□□□□ 0.58
SLC44A1Q8WWI5 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC18.7■□□□□ 0.58
SLC44A1Q8WWI5 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC18.7■□□□□ 0.58
SLC44A1Q8WWI5 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
SLC44A1Q8WWI5 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
SLC44A1Q8WWI5 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SLC44A1Q8WWI5 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC18.7■□□□□ 0.58
SLC44A1Q8WWI5 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SLC44A1Q8WWI5 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC18.7■□□□□ 0.58
SLC44A1Q8WWI5 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
SLC44A1Q8WWI5 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SLC44A1Q8WWI5 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC18.69■□□□□ 0.58
SLC44A1Q8WWI5 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SLC44A1Q8WWI5 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
SLC44A1Q8WWI5 RCC2P3-201ENST00000418112 1537 ntBASIC18.69■□□□□ 0.58
SLC44A1Q8WWI5 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SLC44A1Q8WWI5 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SLC44A1Q8WWI5 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
SLC44A1Q8WWI5 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SLC44A1Q8WWI5 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SLC44A1Q8WWI5 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SLC44A1Q8WWI5 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
SLC44A1Q8WWI5 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SLC44A1Q8WWI5 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SLC44A1Q8WWI5 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SLC44A1Q8WWI5 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SLC44A1Q8WWI5 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SLC44A1Q8WWI5 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SLC44A1Q8WWI5 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC18.69■□□□□ 0.58
SLC44A1Q8WWI5 SERF2-207ENST00000409614 582 ntTSL 2 BASIC18.69■□□□□ 0.58
SLC44A1Q8WWI5 AC239809.2-201ENST00000415381 517 ntBASIC18.69■□□□□ 0.58
SLC44A1Q8WWI5 AC091390.4-202ENST00000476426 537 ntBASIC18.69■□□□□ 0.58
SLC44A1Q8WWI5 AC026366.1-201ENST00000488803 879 ntBASIC18.69■□□□□ 0.58
SLC44A1Q8WWI5 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC18.69■□□□□ 0.58
SLC44A1Q8WWI5 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC18.69■□□□□ 0.58
SLC44A1Q8WWI5 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SLC44A1Q8WWI5 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SLC44A1Q8WWI5 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SLC44A1Q8WWI5 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC18.69■□□□□ 0.58
SLC44A1Q8WWI5 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
SLC44A1Q8WWI5 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
SLC44A1Q8WWI5 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
SLC44A1Q8WWI5 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SLC44A1Q8WWI5 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SLC44A1Q8WWI5 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC18.69■□□□□ 0.58
SLC44A1Q8WWI5 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
SLC44A1Q8WWI5 HTR7P1-201ENST00000538670 1336 ntBASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms