Protein–RNA interactions for Protein: Q8WV44

TRIM41, E3 ubiquitin-protein ligase TRIM41, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41Q8WV44 ILF2-202ENST00000368681 726 ntTSL 2 BASIC31.88■■■□□ 2.69
TRIM41Q8WV44 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
TRIM41Q8WV44 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC31.88■■■□□ 2.69
TRIM41Q8WV44 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC31.88■■■□□ 2.69
TRIM41Q8WV44 RASA4DP-201ENST00000460726 1199 ntBASIC31.88■■■□□ 2.69
TRIM41Q8WV44 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC31.88■■■□□ 2.69
TRIM41Q8WV44 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC31.88■■■□□ 2.69
TRIM41Q8WV44 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC31.88■■■□□ 2.69
TRIM41Q8WV44 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC31.88■■■□□ 2.69
TRIM41Q8WV44 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC31.88■■■□□ 2.69
TRIM41Q8WV44 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC31.88■■■□□ 2.69
TRIM41Q8WV44 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC31.88■■■□□ 2.69
TRIM41Q8WV44 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC31.88■■■□□ 2.69
TRIM41Q8WV44 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC31.88■■■□□ 2.69
TRIM41Q8WV44 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
TRIM41Q8WV44 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC31.88■■■□□ 2.69
TRIM41Q8WV44 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC31.88■■■□□ 2.69
TRIM41Q8WV44 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC31.87■■■□□ 2.69
TRIM41Q8WV44 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC31.87■■■□□ 2.69
TRIM41Q8WV44 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC31.87■■■□□ 2.69
TRIM41Q8WV44 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC31.87■■■□□ 2.69
TRIM41Q8WV44 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC31.87■■■□□ 2.69
TRIM41Q8WV44 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC31.87■■■□□ 2.69
TRIM41Q8WV44 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC31.87■■■□□ 2.69
TRIM41Q8WV44 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC31.87■■■□□ 2.69
TRIM41Q8WV44 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC31.87■■■□□ 2.69
TRIM41Q8WV44 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC31.87■■■□□ 2.69
TRIM41Q8WV44 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC31.87■■■□□ 2.69
TRIM41Q8WV44 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC31.87■■■□□ 2.69
TRIM41Q8WV44 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC31.87■■■□□ 2.69
TRIM41Q8WV44 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC31.87■■■□□ 2.69
TRIM41Q8WV44 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC31.87■■■□□ 2.69
TRIM41Q8WV44 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC31.87■■■□□ 2.69
TRIM41Q8WV44 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC31.87■■■□□ 2.69
TRIM41Q8WV44 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC31.87■■■□□ 2.69
TRIM41Q8WV44 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
TRIM41Q8WV44 AC116562.4-201ENST00000641316 2276 ntBASIC31.87■■■□□ 2.69
TRIM41Q8WV44 AC005332.7-201ENST00000614046 2005 ntBASIC31.87■■■□□ 2.69
TRIM41Q8WV44 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
TRIM41Q8WV44 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC31.86■■■□□ 2.69
TRIM41Q8WV44 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
TRIM41Q8WV44 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC31.86■■■□□ 2.69
TRIM41Q8WV44 TLE1-202ENST00000376484 666 ntTSL 3 BASIC31.86■■■□□ 2.69
TRIM41Q8WV44 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC31.86■■■□□ 2.69
TRIM41Q8WV44 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC31.86■■■□□ 2.69
TRIM41Q8WV44 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC31.86■■■□□ 2.69
TRIM41Q8WV44 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC31.86■■■□□ 2.69
TRIM41Q8WV44 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC31.86■■■□□ 2.69
TRIM41Q8WV44 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
TRIM41Q8WV44 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
TRIM41Q8WV44 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC31.85■■■□□ 2.69
TRIM41Q8WV44 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
TRIM41Q8WV44 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
TRIM41Q8WV44 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC31.85■■■□□ 2.69
TRIM41Q8WV44 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
TRIM41Q8WV44 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC31.85■■■□□ 2.69
TRIM41Q8WV44 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC31.85■■■□□ 2.69
TRIM41Q8WV44 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
TRIM41Q8WV44 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC31.85■■■□□ 2.69
TRIM41Q8WV44 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC31.85■■■□□ 2.69
TRIM41Q8WV44 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
TRIM41Q8WV44 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
TRIM41Q8WV44 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
TRIM41Q8WV44 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC31.84■■■□□ 2.69
TRIM41Q8WV44 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
TRIM41Q8WV44 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC31.84■■■□□ 2.69
TRIM41Q8WV44 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
TRIM41Q8WV44 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
TRIM41Q8WV44 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC31.84■■■□□ 2.69
TRIM41Q8WV44 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC31.84■■■□□ 2.69
TRIM41Q8WV44 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC31.84■■■□□ 2.69
TRIM41Q8WV44 SPDYE15P-201ENST00000424157 909 ntBASIC31.84■■■□□ 2.69
TRIM41Q8WV44 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC31.84■■■□□ 2.69
TRIM41Q8WV44 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC31.84■■■□□ 2.69
TRIM41Q8WV44 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
TRIM41Q8WV44 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
TRIM41Q8WV44 AL512353.2-201ENST00000448759 1962 ntBASIC31.84■■■□□ 2.69
TRIM41Q8WV44 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC31.84■■■□□ 2.69
TRIM41Q8WV44 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC31.84■■■□□ 2.69
TRIM41Q8WV44 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
TRIM41Q8WV44 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
TRIM41Q8WV44 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
TRIM41Q8WV44 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC31.83■■■□□ 2.69
TRIM41Q8WV44 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
TRIM41Q8WV44 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
TRIM41Q8WV44 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC31.83■■■□□ 2.69
TRIM41Q8WV44 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC31.83■■■□□ 2.69
TRIM41Q8WV44 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC31.83■■■□□ 2.69
TRIM41Q8WV44 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
TRIM41Q8WV44 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC31.83■■■□□ 2.69
TRIM41Q8WV44 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC31.83■■■□□ 2.69
TRIM41Q8WV44 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
TRIM41Q8WV44 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC31.83■■■□□ 2.69
TRIM41Q8WV44 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
TRIM41Q8WV44 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
TRIM41Q8WV44 MPI-205ENST00000562606 1052 ntTSL 3 BASIC31.83■■■□□ 2.69
TRIM41Q8WV44 AC011498.5-201ENST00000592027 486 ntBASIC31.83■■■□□ 2.69
TRIM41Q8WV44 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC31.83■■■□□ 2.69
TRIM41Q8WV44 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC31.83■■■□□ 2.69
TRIM41Q8WV44 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms