Protein–RNA interactions for Protein: Q8TEC5

SH3RF2, Putative E3 ubiquitin-protein ligase SH3RF2, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF2Q8TEC5 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SH3RF2Q8TEC5 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC19.32■□□□□ 0.68
SH3RF2Q8TEC5 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC19.32■□□□□ 0.68
SH3RF2Q8TEC5 AL391807.1-203ENST00000604392 2365 ntBASIC19.32■□□□□ 0.68
SH3RF2Q8TEC5 AP000974.1-201ENST00000623909 2387 ntBASIC19.32■□□□□ 0.68
SH3RF2Q8TEC5 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
SH3RF2Q8TEC5 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC19.32■□□□□ 0.68
SH3RF2Q8TEC5 DUSP5P1-201ENST00000441325 1139 ntBASIC19.32■□□□□ 0.68
SH3RF2Q8TEC5 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
SH3RF2Q8TEC5 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC19.32■□□□□ 0.68
SH3RF2Q8TEC5 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC19.32■□□□□ 0.68
SH3RF2Q8TEC5 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC19.32■□□□□ 0.68
SH3RF2Q8TEC5 AC104390.1-201ENST00000555663 520 ntBASIC19.32■□□□□ 0.68
SH3RF2Q8TEC5 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
SH3RF2Q8TEC5 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
SH3RF2Q8TEC5 CLEC4GP1-201ENST00000596555 870 ntBASIC19.32■□□□□ 0.68
SH3RF2Q8TEC5 AC010240.3-201ENST00000607688 395 ntBASIC19.32■□□□□ 0.68
SH3RF2Q8TEC5 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
SH3RF2Q8TEC5 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC19.32■□□□□ 0.68
SH3RF2Q8TEC5 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SH3RF2Q8TEC5 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC19.32■□□□□ 0.68
SH3RF2Q8TEC5 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC19.32■□□□□ 0.68
SH3RF2Q8TEC5 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SH3RF2Q8TEC5 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SH3RF2Q8TEC5 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
SH3RF2Q8TEC5 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SH3RF2Q8TEC5 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC19.32■□□□□ 0.68
SH3RF2Q8TEC5 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SH3RF2Q8TEC5 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SH3RF2Q8TEC5 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
SH3RF2Q8TEC5 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
SH3RF2Q8TEC5 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
SH3RF2Q8TEC5 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
SH3RF2Q8TEC5 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
SH3RF2Q8TEC5 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SH3RF2Q8TEC5 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC19.31■□□□□ 0.68
SH3RF2Q8TEC5 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC19.31■□□□□ 0.68
SH3RF2Q8TEC5 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SH3RF2Q8TEC5 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC19.31■□□□□ 0.68
SH3RF2Q8TEC5 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
SH3RF2Q8TEC5 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
SH3RF2Q8TEC5 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC19.31■□□□□ 0.68
SH3RF2Q8TEC5 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SH3RF2Q8TEC5 SPEG-225ENST00000617028 815 ntTSL 5 BASIC19.31■□□□□ 0.68
SH3RF2Q8TEC5 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SH3RF2Q8TEC5 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SH3RF2Q8TEC5 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SH3RF2Q8TEC5 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC19.31■□□□□ 0.68
SH3RF2Q8TEC5 AL162741.1-201ENST00000565563 1558 ntBASIC19.31■□□□□ 0.68
SH3RF2Q8TEC5 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC19.31■□□□□ 0.68
SH3RF2Q8TEC5 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SH3RF2Q8TEC5 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
SH3RF2Q8TEC5 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SH3RF2Q8TEC5 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SH3RF2Q8TEC5 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC19.3■□□□□ 0.68
SH3RF2Q8TEC5 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC19.3■□□□□ 0.68
SH3RF2Q8TEC5 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SH3RF2Q8TEC5 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
SH3RF2Q8TEC5 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC19.3■□□□□ 0.68
SH3RF2Q8TEC5 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
SH3RF2Q8TEC5 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SH3RF2Q8TEC5 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
SH3RF2Q8TEC5 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
SH3RF2Q8TEC5 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SH3RF2Q8TEC5 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC19.3■□□□□ 0.68
SH3RF2Q8TEC5 AC092119.3-201ENST00000612618 583 ntBASIC19.3■□□□□ 0.68
SH3RF2Q8TEC5 NPAP1P7-201ENST00000613027 823 ntBASIC19.3■□□□□ 0.68
SH3RF2Q8TEC5 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC19.3■□□□□ 0.68
SH3RF2Q8TEC5 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SH3RF2Q8TEC5 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SH3RF2Q8TEC5 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
SH3RF2Q8TEC5 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC19.3■□□□□ 0.68
SH3RF2Q8TEC5 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SH3RF2Q8TEC5 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SH3RF2Q8TEC5 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC19.3■□□□□ 0.68
SH3RF2Q8TEC5 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC19.3■□□□□ 0.68
SH3RF2Q8TEC5 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SH3RF2Q8TEC5 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SH3RF2Q8TEC5 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC19.29■□□□□ 0.68
SH3RF2Q8TEC5 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC19.29■□□□□ 0.68
SH3RF2Q8TEC5 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC19.29■□□□□ 0.68
SH3RF2Q8TEC5 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SH3RF2Q8TEC5 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SH3RF2Q8TEC5 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SH3RF2Q8TEC5 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
SH3RF2Q8TEC5 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SH3RF2Q8TEC5 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC19.29■□□□□ 0.68
SH3RF2Q8TEC5 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
SH3RF2Q8TEC5 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC19.29■□□□□ 0.68
SH3RF2Q8TEC5 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC19.29■□□□□ 0.68
SH3RF2Q8TEC5 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SH3RF2Q8TEC5 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
SH3RF2Q8TEC5 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC19.29■□□□□ 0.68
SH3RF2Q8TEC5 BX276092.5-203ENST00000456199 560 ntBASIC19.29■□□□□ 0.68
SH3RF2Q8TEC5 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC19.29■□□□□ 0.68
SH3RF2Q8TEC5 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC19.29■□□□□ 0.68
SH3RF2Q8TEC5 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC19.29■□□□□ 0.68
SH3RF2Q8TEC5 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC19.29■□□□□ 0.68
SH3RF2Q8TEC5 AL121672.3-201ENST00000608644 468 ntBASIC19.29■□□□□ 0.68
SH3RF2Q8TEC5 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms