Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CPEB3Q8NE35 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CPEB3Q8NE35 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CPEB3Q8NE35 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CPEB3Q8NE35 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
CPEB3Q8NE35 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC16.31■□□□□ 0.2
CPEB3Q8NE35 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CPEB3Q8NE35 LINC01568-207ENST00000641790 1380 ntBASIC16.31■□□□□ 0.2
CPEB3Q8NE35 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CPEB3Q8NE35 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CPEB3Q8NE35 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC16.31■□□□□ 0.2
CPEB3Q8NE35 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CPEB3Q8NE35 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC16.31■□□□□ 0.2
CPEB3Q8NE35 ECEL1P2-202ENST00000465689 757 ntBASIC16.31■□□□□ 0.2
CPEB3Q8NE35 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CPEB3Q8NE35 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC16.31■□□□□ 0.2
CPEB3Q8NE35 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
CPEB3Q8NE35 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC16.31■□□□□ 0.2
CPEB3Q8NE35 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC16.31■□□□□ 0.2
CPEB3Q8NE35 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC16.31■□□□□ 0.2
CPEB3Q8NE35 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC16.31■□□□□ 0.2
CPEB3Q8NE35 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC16.31■□□□□ 0.2
CPEB3Q8NE35 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CPEB3Q8NE35 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CPEB3Q8NE35 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC16.31■□□□□ 0.2
CPEB3Q8NE35 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
CPEB3Q8NE35 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CPEB3Q8NE35 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CPEB3Q8NE35 ANO7L1-203ENST00000602586 1720 ntBASIC16.31■□□□□ 0.2
CPEB3Q8NE35 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CPEB3Q8NE35 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CPEB3Q8NE35 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC16.3■□□□□ 0.2
CPEB3Q8NE35 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC16.3■□□□□ 0.2
CPEB3Q8NE35 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CPEB3Q8NE35 MCCD1P1-208ENST00000445732 328 ntBASIC16.3■□□□□ 0.2
CPEB3Q8NE35 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC16.3■□□□□ 0.2
CPEB3Q8NE35 AC128688.1-201ENST00000487626 519 ntBASIC16.3■□□□□ 0.2
CPEB3Q8NE35 RPS20-210ENST00000523936 899 ntTSL 2 BASIC16.3■□□□□ 0.2
CPEB3Q8NE35 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CPEB3Q8NE35 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC16.3■□□□□ 0.2
CPEB3Q8NE35 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CPEB3Q8NE35 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC16.3■□□□□ 0.2
CPEB3Q8NE35 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC16.3■□□□□ 0.2
CPEB3Q8NE35 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC16.3■□□□□ 0.2
CPEB3Q8NE35 AC010653.2-201ENST00000623505 997 ntBASIC16.3■□□□□ 0.2
CPEB3Q8NE35 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC16.3■□□□□ 0.2
CPEB3Q8NE35 AL138781.2-201ENST00000617896 1843 ntBASIC16.3■□□□□ 0.2
CPEB3Q8NE35 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CPEB3Q8NE35 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
CPEB3Q8NE35 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC16.3■□□□□ 0.2
CPEB3Q8NE35 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CPEB3Q8NE35 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CPEB3Q8NE35 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CPEB3Q8NE35 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CPEB3Q8NE35 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CPEB3Q8NE35 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CPEB3Q8NE35 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
CPEB3Q8NE35 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CPEB3Q8NE35 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
CPEB3Q8NE35 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CPEB3Q8NE35 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CPEB3Q8NE35 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
CPEB3Q8NE35 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
CPEB3Q8NE35 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CPEB3Q8NE35 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
CPEB3Q8NE35 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CPEB3Q8NE35 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC16.29■□□□□ 0.2
CPEB3Q8NE35 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC16.29■□□□□ 0.2
CPEB3Q8NE35 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CPEB3Q8NE35 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CPEB3Q8NE35 ENSA-205ENST00000361532 792 ntTSL 2 BASIC16.29■□□□□ 0.2
CPEB3Q8NE35 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CPEB3Q8NE35 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CPEB3Q8NE35 LINC01023-201ENST00000606054 436 ntBASIC16.29■□□□□ 0.2
CPEB3Q8NE35 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
CPEB3Q8NE35 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CPEB3Q8NE35 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC16.29■□□□□ 0.2
CPEB3Q8NE35 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CPEB3Q8NE35 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CPEB3Q8NE35 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
CPEB3Q8NE35 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
CPEB3Q8NE35 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CPEB3Q8NE35 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CPEB3Q8NE35 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
CPEB3Q8NE35 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CPEB3Q8NE35 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
CPEB3Q8NE35 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CPEB3Q8NE35 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC16.28■□□□□ 0.2
CPEB3Q8NE35 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC16.28■□□□□ 0.2
CPEB3Q8NE35 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC16.28■□□□□ 0.2
CPEB3Q8NE35 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
CPEB3Q8NE35 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CPEB3Q8NE35 AC026471.1-201ENST00000564629 3026 ntBASIC16.28■□□□□ 0.2
CPEB3Q8NE35 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CPEB3Q8NE35 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CPEB3Q8NE35 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CPEB3Q8NE35 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CPEB3Q8NE35 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC16.28■□□□□ 0.2
CPEB3Q8NE35 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC16.28■□□□□ 0.2
CPEB3Q8NE35 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms