Protein–RNA interactions for Protein: Q8N967

LRTM2, Leucine-rich repeat and transmembrane domain-containing protein 2, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM2Q8N967 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LRTM2Q8N967 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
LRTM2Q8N967 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LRTM2Q8N967 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LRTM2Q8N967 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LRTM2Q8N967 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LRTM2Q8N967 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
LRTM2Q8N967 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LRTM2Q8N967 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LRTM2Q8N967 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC15.23■□□□□ 0.03
LRTM2Q8N967 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LRTM2Q8N967 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LRTM2Q8N967 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LRTM2Q8N967 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LRTM2Q8N967 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
LRTM2Q8N967 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LRTM2Q8N967 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LRTM2Q8N967 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC15.23■□□□□ 0.03
LRTM2Q8N967 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC15.23■□□□□ 0.03
LRTM2Q8N967 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC15.23■□□□□ 0.03
LRTM2Q8N967 DUSP5P2-201ENST00000426873 1033 ntBASIC15.23■□□□□ 0.03
LRTM2Q8N967 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC15.23■□□□□ 0.03
LRTM2Q8N967 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC15.23■□□□□ 0.03
LRTM2Q8N967 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC15.23■□□□□ 0.03
LRTM2Q8N967 AC105036.2-201ENST00000569468 176 ntBASIC15.23■□□□□ 0.03
LRTM2Q8N967 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC15.23■□□□□ 0.03
LRTM2Q8N967 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC15.23■□□□□ 0.03
LRTM2Q8N967 AC087623.3-201ENST00000607047 1098 ntBASIC15.23■□□□□ 0.03
LRTM2Q8N967 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LRTM2Q8N967 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC15.23■□□□□ 0.03
LRTM2Q8N967 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC15.23■□□□□ 0.03
LRTM2Q8N967 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LRTM2Q8N967 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
LRTM2Q8N967 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LRTM2Q8N967 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LRTM2Q8N967 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC15.23■□□□□ 0.03
LRTM2Q8N967 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LRTM2Q8N967 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
LRTM2Q8N967 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
LRTM2Q8N967 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
LRTM2Q8N967 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LRTM2Q8N967 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
LRTM2Q8N967 HLA-DQB1-201ENST00000374943 1656 ntBASIC15.22■□□□□ 0.03
LRTM2Q8N967 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LRTM2Q8N967 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC15.22■□□□□ 0.03
LRTM2Q8N967 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
LRTM2Q8N967 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LRTM2Q8N967 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
LRTM2Q8N967 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LRTM2Q8N967 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC15.22■□□□□ 0.03
LRTM2Q8N967 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LRTM2Q8N967 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC15.22■□□□□ 0.03
LRTM2Q8N967 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
LRTM2Q8N967 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LRTM2Q8N967 NARF-204ENST00000390006 1766 ntTSL 2 BASIC15.22■□□□□ 0.03
LRTM2Q8N967 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC15.22■□□□□ 0.03
LRTM2Q8N967 POU5F1P3-201ENST00000428824 1078 ntBASIC15.22■□□□□ 0.03
LRTM2Q8N967 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC15.22■□□□□ 0.03
LRTM2Q8N967 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LRTM2Q8N967 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC15.22■□□□□ 0.03
LRTM2Q8N967 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC15.22■□□□□ 0.03
LRTM2Q8N967 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC15.22■□□□□ 0.03
LRTM2Q8N967 HLA-B-256ENST00000639848 1089 ntBASIC15.22■□□□□ 0.03
LRTM2Q8N967 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LRTM2Q8N967 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
LRTM2Q8N967 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
LRTM2Q8N967 MYLKP1-201ENST00000509077 1580 ntBASIC15.22■□□□□ 0.03
LRTM2Q8N967 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LRTM2Q8N967 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
LRTM2Q8N967 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LRTM2Q8N967 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC15.22■□□□□ 0.03
LRTM2Q8N967 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
LRTM2Q8N967 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LRTM2Q8N967 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC15.22■□□□□ 0.03
LRTM2Q8N967 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC15.22■□□□□ 0.03
LRTM2Q8N967 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
LRTM2Q8N967 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
LRTM2Q8N967 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
LRTM2Q8N967 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LRTM2Q8N967 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LRTM2Q8N967 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
LRTM2Q8N967 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
LRTM2Q8N967 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LRTM2Q8N967 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
LRTM2Q8N967 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC15.21■□□□□ 0.03
LRTM2Q8N967 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
LRTM2Q8N967 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LRTM2Q8N967 AC092368.3-202ENST00000574180 1591 ntBASIC15.21■□□□□ 0.03
LRTM2Q8N967 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
LRTM2Q8N967 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LRTM2Q8N967 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC15.21■□□□□ 0.03
LRTM2Q8N967 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC15.21■□□□□ 0.03
LRTM2Q8N967 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC15.21■□□□□ 0.03
LRTM2Q8N967 KRT18P41-201ENST00000518924 1277 ntBASIC15.21■□□□□ 0.03
LRTM2Q8N967 REXO2-208ENST00000539754 791 ntTSL 2 BASIC15.21■□□□□ 0.03
LRTM2Q8N967 C1QL1P1-201ENST00000568105 661 ntBASIC15.21■□□□□ 0.03
LRTM2Q8N967 MNT-208ENST00000575394 606 ntTSL 4 BASIC15.21■□□□□ 0.03
LRTM2Q8N967 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC15.21■□□□□ 0.03
LRTM2Q8N967 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
LRTM2Q8N967 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms