Protein–RNA interactions for Protein: Q8N5U0

C11orf42, Uncharacterized protein C11orf42, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf42Q8N5U0 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
C11orf42Q8N5U0 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
C11orf42Q8N5U0 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
C11orf42Q8N5U0 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
C11orf42Q8N5U0 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
C11orf42Q8N5U0 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC15.53■□□□□ 0.08
C11orf42Q8N5U0 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
C11orf42Q8N5U0 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
C11orf42Q8N5U0 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
C11orf42Q8N5U0 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
C11orf42Q8N5U0 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC15.52■□□□□ 0.08
C11orf42Q8N5U0 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC15.52■□□□□ 0.08
C11orf42Q8N5U0 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
C11orf42Q8N5U0 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC15.52■□□□□ 0.08
C11orf42Q8N5U0 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC15.52■□□□□ 0.08
C11orf42Q8N5U0 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC15.52■□□□□ 0.08
C11orf42Q8N5U0 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
C11orf42Q8N5U0 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
C11orf42Q8N5U0 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
C11orf42Q8N5U0 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
C11orf42Q8N5U0 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
C11orf42Q8N5U0 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
C11orf42Q8N5U0 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
C11orf42Q8N5U0 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
C11orf42Q8N5U0 AC211429.1-201ENST00000415277 523 ntBASIC15.52■□□□□ 0.08
C11orf42Q8N5U0 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
C11orf42Q8N5U0 AC007663.1-201ENST00000438948 1240 ntBASIC15.52■□□□□ 0.08
C11orf42Q8N5U0 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
C11orf42Q8N5U0 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
C11orf42Q8N5U0 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC15.52■□□□□ 0.08
C11orf42Q8N5U0 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC15.52■□□□□ 0.08
C11orf42Q8N5U0 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC15.52■□□□□ 0.08
C11orf42Q8N5U0 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
C11orf42Q8N5U0 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC15.52■□□□□ 0.08
C11orf42Q8N5U0 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC15.52■□□□□ 0.08
C11orf42Q8N5U0 AC145285.6-201ENST00000604632 637 ntBASIC15.52■□□□□ 0.08
C11orf42Q8N5U0 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
C11orf42Q8N5U0 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
C11orf42Q8N5U0 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
C11orf42Q8N5U0 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
C11orf42Q8N5U0 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC15.52■□□□□ 0.07
C11orf42Q8N5U0 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
C11orf42Q8N5U0 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.07
C11orf42Q8N5U0 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
C11orf42Q8N5U0 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.07
C11orf42Q8N5U0 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
C11orf42Q8N5U0 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC15.52■□□□□ 0.07
C11orf42Q8N5U0 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC15.51■□□□□ 0.07
C11orf42Q8N5U0 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
C11orf42Q8N5U0 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
C11orf42Q8N5U0 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
C11orf42Q8N5U0 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
C11orf42Q8N5U0 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
C11orf42Q8N5U0 AC098818.2-201ENST00000564925 2320 ntBASIC15.51■□□□□ 0.07
C11orf42Q8N5U0 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
C11orf42Q8N5U0 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
C11orf42Q8N5U0 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC15.51■□□□□ 0.07
C11orf42Q8N5U0 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC15.51■□□□□ 0.07
C11orf42Q8N5U0 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
C11orf42Q8N5U0 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
C11orf42Q8N5U0 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
C11orf42Q8N5U0 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
C11orf42Q8N5U0 TSPY17P-201ENST00000450329 467 ntBASIC15.51■□□□□ 0.07
C11orf42Q8N5U0 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC15.51■□□□□ 0.07
C11orf42Q8N5U0 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
C11orf42Q8N5U0 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC15.51■□□□□ 0.07
C11orf42Q8N5U0 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
C11orf42Q8N5U0 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC15.51■□□□□ 0.07
C11orf42Q8N5U0 AC133561.5-201ENST00000635547 218 ntBASIC15.51■□□□□ 0.07
C11orf42Q8N5U0 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
C11orf42Q8N5U0 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
C11orf42Q8N5U0 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
C11orf42Q8N5U0 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
C11orf42Q8N5U0 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC15.51■□□□□ 0.07
C11orf42Q8N5U0 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
C11orf42Q8N5U0 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
C11orf42Q8N5U0 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
C11orf42Q8N5U0 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
C11orf42Q8N5U0 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
C11orf42Q8N5U0 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
C11orf42Q8N5U0 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
C11orf42Q8N5U0 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
C11orf42Q8N5U0 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
C11orf42Q8N5U0 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC15.5■□□□□ 0.07
C11orf42Q8N5U0 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC15.5■□□□□ 0.07
C11orf42Q8N5U0 LINC01568-207ENST00000641790 1380 ntBASIC15.5■□□□□ 0.07
C11orf42Q8N5U0 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC15.5■□□□□ 0.07
C11orf42Q8N5U0 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
C11orf42Q8N5U0 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
C11orf42Q8N5U0 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC15.5■□□□□ 0.07
C11orf42Q8N5U0 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
C11orf42Q8N5U0 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
C11orf42Q8N5U0 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC15.5■□□□□ 0.07
C11orf42Q8N5U0 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
C11orf42Q8N5U0 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
C11orf42Q8N5U0 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC15.5■□□□□ 0.07
C11orf42Q8N5U0 ARL16-209ENST00000573715 763 ntTSL 3 BASIC15.5■□□□□ 0.07
C11orf42Q8N5U0 ARL16-211ENST00000576135 694 ntTSL 3 BASIC15.5■□□□□ 0.07
C11orf42Q8N5U0 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC15.5■□□□□ 0.07
C11orf42Q8N5U0 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC15.5■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms