Protein–RNA interactions for Protein: Q8N4B4

FBXO39, F-box only protein 39, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO39Q8N4B4 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
FBXO39Q8N4B4 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
FBXO39Q8N4B4 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC18.64■□□□□ 0.57
FBXO39Q8N4B4 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.57
FBXO39Q8N4B4 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
FBXO39Q8N4B4 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
FBXO39Q8N4B4 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
FBXO39Q8N4B4 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC18.63■□□□□ 0.57
FBXO39Q8N4B4 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC18.63■□□□□ 0.57
FBXO39Q8N4B4 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
FBXO39Q8N4B4 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
FBXO39Q8N4B4 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
FBXO39Q8N4B4 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
FBXO39Q8N4B4 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
FBXO39Q8N4B4 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
FBXO39Q8N4B4 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC18.63■□□□□ 0.57
FBXO39Q8N4B4 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC18.63■□□□□ 0.57
FBXO39Q8N4B4 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
FBXO39Q8N4B4 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
FBXO39Q8N4B4 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
FBXO39Q8N4B4 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
FBXO39Q8N4B4 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
FBXO39Q8N4B4 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC18.63■□□□□ 0.57
FBXO39Q8N4B4 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC18.63■□□□□ 0.57
FBXO39Q8N4B4 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
FBXO39Q8N4B4 CCR12P-201ENST00000446203 998 ntBASIC18.63■□□□□ 0.57
FBXO39Q8N4B4 FAM207BP-201ENST00000447172 505 ntBASIC18.63■□□□□ 0.57
FBXO39Q8N4B4 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC18.63■□□□□ 0.57
FBXO39Q8N4B4 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
FBXO39Q8N4B4 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
FBXO39Q8N4B4 GPX4-207ENST00000589115 812 ntTSL 2 BASIC18.63■□□□□ 0.57
FBXO39Q8N4B4 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC18.63■□□□□ 0.57
FBXO39Q8N4B4 AC083906.6-201ENST00000641366 219 ntBASIC18.63■□□□□ 0.57
FBXO39Q8N4B4 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
FBXO39Q8N4B4 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
FBXO39Q8N4B4 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
FBXO39Q8N4B4 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
FBXO39Q8N4B4 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
FBXO39Q8N4B4 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
FBXO39Q8N4B4 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
FBXO39Q8N4B4 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
FBXO39Q8N4B4 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
FBXO39Q8N4B4 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.63■□□□□ 0.57
FBXO39Q8N4B4 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC18.63■□□□□ 0.57
FBXO39Q8N4B4 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
FBXO39Q8N4B4 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC18.62■□□□□ 0.57
FBXO39Q8N4B4 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
FBXO39Q8N4B4 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
FBXO39Q8N4B4 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC18.62■□□□□ 0.57
FBXO39Q8N4B4 WIZP1-201ENST00000531444 2299 ntBASIC18.62■□□□□ 0.57
FBXO39Q8N4B4 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
FBXO39Q8N4B4 MFAP1P1-201ENST00000442257 1255 ntBASIC18.62■□□□□ 0.57
FBXO39Q8N4B4 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC18.62■□□□□ 0.57
FBXO39Q8N4B4 AC022616.7-201ENST00000525383 220 ntBASIC18.62■□□□□ 0.57
FBXO39Q8N4B4 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC18.62■□□□□ 0.57
FBXO39Q8N4B4 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
FBXO39Q8N4B4 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
FBXO39Q8N4B4 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
FBXO39Q8N4B4 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
FBXO39Q8N4B4 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC18.62■□□□□ 0.57
FBXO39Q8N4B4 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
FBXO39Q8N4B4 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
FBXO39Q8N4B4 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
FBXO39Q8N4B4 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
FBXO39Q8N4B4 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
FBXO39Q8N4B4 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC18.62■□□□□ 0.57
FBXO39Q8N4B4 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
FBXO39Q8N4B4 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
FBXO39Q8N4B4 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
FBXO39Q8N4B4 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
FBXO39Q8N4B4 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
FBXO39Q8N4B4 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
FBXO39Q8N4B4 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
FBXO39Q8N4B4 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
FBXO39Q8N4B4 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
FBXO39Q8N4B4 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
FBXO39Q8N4B4 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
FBXO39Q8N4B4 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
FBXO39Q8N4B4 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
FBXO39Q8N4B4 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC18.61■□□□□ 0.57
FBXO39Q8N4B4 MED25-212ENST00000618715 1467 ntTSL 5 BASIC18.61■□□□□ 0.57
FBXO39Q8N4B4 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
FBXO39Q8N4B4 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
FBXO39Q8N4B4 GUK1-204ENST00000366721 689 ntTSL 3 BASIC18.61■□□□□ 0.57
FBXO39Q8N4B4 PTPA-216ENST00000432651 857 ntTSL 2 BASIC18.61■□□□□ 0.57
FBXO39Q8N4B4 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC18.61■□□□□ 0.57
FBXO39Q8N4B4 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
FBXO39Q8N4B4 AC008040.2-201ENST00000461049 708 ntBASIC18.61■□□□□ 0.57
FBXO39Q8N4B4 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC18.61■□□□□ 0.57
FBXO39Q8N4B4 AC063952.2-201ENST00000498792 1227 ntBASIC18.61■□□□□ 0.57
FBXO39Q8N4B4 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC18.61■□□□□ 0.57
FBXO39Q8N4B4 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC18.61■□□□□ 0.57
FBXO39Q8N4B4 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC18.61■□□□□ 0.57
FBXO39Q8N4B4 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
FBXO39Q8N4B4 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
FBXO39Q8N4B4 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC18.61■□□□□ 0.57
FBXO39Q8N4B4 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
FBXO39Q8N4B4 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
FBXO39Q8N4B4 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
FBXO39Q8N4B4 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms