Protein–RNA interactions for Protein: Q8N271

PROM2, Prominin-2, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM2Q8N271 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
PROM2Q8N271 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
PROM2Q8N271 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC23.73■■□□□ 1.39
PROM2Q8N271 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
PROM2Q8N271 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
PROM2Q8N271 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
PROM2Q8N271 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
PROM2Q8N271 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC23.73■■□□□ 1.39
PROM2Q8N271 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC23.73■■□□□ 1.39
PROM2Q8N271 KRT18P28-201ENST00000453838 1332 ntBASIC23.73■■□□□ 1.39
PROM2Q8N271 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC23.73■■□□□ 1.39
PROM2Q8N271 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
PROM2Q8N271 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC23.72■■□□□ 1.39
PROM2Q8N271 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
PROM2Q8N271 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC23.72■■□□□ 1.39
PROM2Q8N271 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
PROM2Q8N271 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
PROM2Q8N271 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC23.72■■□□□ 1.39
PROM2Q8N271 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
PROM2Q8N271 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC23.72■■□□□ 1.39
PROM2Q8N271 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC23.72■■□□□ 1.39
PROM2Q8N271 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC23.72■■□□□ 1.39
PROM2Q8N271 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC23.72■■□□□ 1.39
PROM2Q8N271 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC23.72■■□□□ 1.39
PROM2Q8N271 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC23.72■■□□□ 1.39
PROM2Q8N271 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
PROM2Q8N271 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC23.72■■□□□ 1.39
PROM2Q8N271 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
PROM2Q8N271 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
PROM2Q8N271 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
PROM2Q8N271 AC034236.2-201ENST00000606662 1610 ntBASIC23.72■■□□□ 1.39
PROM2Q8N271 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
PROM2Q8N271 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
PROM2Q8N271 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
PROM2Q8N271 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
PROM2Q8N271 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
PROM2Q8N271 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
PROM2Q8N271 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC23.72■■□□□ 1.39
PROM2Q8N271 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC23.72■■□□□ 1.39
PROM2Q8N271 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC23.72■■□□□ 1.39
PROM2Q8N271 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC23.72■■□□□ 1.39
PROM2Q8N271 AC073314.1-201ENST00000568729 2216 ntBASIC23.72■■□□□ 1.39
PROM2Q8N271 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
PROM2Q8N271 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
PROM2Q8N271 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC23.71■■□□□ 1.39
PROM2Q8N271 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
PROM2Q8N271 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC23.71■■□□□ 1.39
PROM2Q8N271 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
PROM2Q8N271 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC23.71■■□□□ 1.39
PROM2Q8N271 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
PROM2Q8N271 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
PROM2Q8N271 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
PROM2Q8N271 CYP51A1P1-201ENST00000492267 1507 ntBASIC23.71■■□□□ 1.39
PROM2Q8N271 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
PROM2Q8N271 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC23.71■■□□□ 1.39
PROM2Q8N271 COA5-202ENST00000409997 557 ntTSL 4 BASIC23.71■■□□□ 1.39
PROM2Q8N271 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC23.71■■□□□ 1.39
PROM2Q8N271 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
PROM2Q8N271 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC23.7■■□□□ 1.39
PROM2Q8N271 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
PROM2Q8N271 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC23.7■■□□□ 1.39
PROM2Q8N271 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC23.7■■□□□ 1.39
PROM2Q8N271 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
PROM2Q8N271 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC23.7■■□□□ 1.38
PROM2Q8N271 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC23.7■■□□□ 1.38
PROM2Q8N271 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC23.7■■□□□ 1.38
PROM2Q8N271 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC23.7■■□□□ 1.38
PROM2Q8N271 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC23.7■■□□□ 1.38
PROM2Q8N271 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC23.7■■□□□ 1.38
PROM2Q8N271 CYMP-203ENST00000474680 1263 ntBASIC23.7■■□□□ 1.38
PROM2Q8N271 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC23.7■■□□□ 1.38
PROM2Q8N271 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC23.7■■□□□ 1.38
PROM2Q8N271 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC23.7■■□□□ 1.38
PROM2Q8N271 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC23.7■■□□□ 1.38
PROM2Q8N271 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC23.7■■□□□ 1.38
PROM2Q8N271 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC23.7■■□□□ 1.38
PROM2Q8N271 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
PROM2Q8N271 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
PROM2Q8N271 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
PROM2Q8N271 HLA-J-201ENST00000462773 1622 ntBASIC23.7■■□□□ 1.38
PROM2Q8N271 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
PROM2Q8N271 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
PROM2Q8N271 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
PROM2Q8N271 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC23.69■■□□□ 1.38
PROM2Q8N271 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC23.69■■□□□ 1.38
PROM2Q8N271 AP005117.1-201ENST00000584346 1413 ntBASIC23.69■■□□□ 1.38
PROM2Q8N271 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
PROM2Q8N271 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
PROM2Q8N271 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC23.69■■□□□ 1.38
PROM2Q8N271 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
PROM2Q8N271 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC23.69■■□□□ 1.38
PROM2Q8N271 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC23.69■■□□□ 1.38
PROM2Q8N271 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
PROM2Q8N271 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
PROM2Q8N271 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC23.69■■□□□ 1.38
PROM2Q8N271 RFPL4AP1-201ENST00000530883 850 ntBASIC23.69■■□□□ 1.38
PROM2Q8N271 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC23.69■■□□□ 1.38
PROM2Q8N271 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
PROM2Q8N271 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC23.69■■□□□ 1.38
PROM2Q8N271 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms