Protein–RNA interactions for Protein: Q8N228

SCML4, Sex comb on midleg-like protein 4, humanhuman

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCML4Q8N228 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC19.37■□□□□ 0.69
SCML4Q8N228 SNCG-201ENST00000348795 684 ntTSL 2 BASIC19.37■□□□□ 0.69
SCML4Q8N228 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
SCML4Q8N228 AL359075.1-203ENST00000462729 1002 ntBASIC19.37■□□□□ 0.69
SCML4Q8N228 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
SCML4Q8N228 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
SCML4Q8N228 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC19.37■□□□□ 0.69
SCML4Q8N228 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC19.37■□□□□ 0.69
SCML4Q8N228 AL157888.1-201ENST00000631930 593 ntBASIC19.37■□□□□ 0.69
SCML4Q8N228 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SCML4Q8N228 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC19.37■□□□□ 0.69
SCML4Q8N228 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SCML4Q8N228 AC098818.2-201ENST00000564925 2320 ntBASIC19.37■□□□□ 0.69
SCML4Q8N228 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SCML4Q8N228 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SCML4Q8N228 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
SCML4Q8N228 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC19.37■□□□□ 0.69
SCML4Q8N228 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC19.36■□□□□ 0.69
SCML4Q8N228 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SCML4Q8N228 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SCML4Q8N228 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SCML4Q8N228 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC19.36■□□□□ 0.69
SCML4Q8N228 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SCML4Q8N228 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
SCML4Q8N228 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
SCML4Q8N228 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SCML4Q8N228 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SCML4Q8N228 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SCML4Q8N228 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SCML4Q8N228 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC19.36■□□□□ 0.69
SCML4Q8N228 MIR149-201ENST00000384879 89 ntBASIC19.36■□□□□ 0.69
SCML4Q8N228 PVRIG2P-201ENST00000435460 978 ntBASIC19.36■□□□□ 0.69
SCML4Q8N228 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC19.36■□□□□ 0.69
SCML4Q8N228 NTF6B-201ENST00000591913 560 ntBASIC19.36■□□□□ 0.69
SCML4Q8N228 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC19.36■□□□□ 0.69
SCML4Q8N228 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC19.36■□□□□ 0.69
SCML4Q8N228 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC19.36■□□□□ 0.69
SCML4Q8N228 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SCML4Q8N228 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SCML4Q8N228 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SCML4Q8N228 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SCML4Q8N228 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SCML4Q8N228 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SCML4Q8N228 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
SCML4Q8N228 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SCML4Q8N228 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SCML4Q8N228 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC19.35■□□□□ 0.69
SCML4Q8N228 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SCML4Q8N228 HLA-F-220ENST00000434407 884 ntBASIC19.35■□□□□ 0.69
SCML4Q8N228 AC112907.2-201ENST00000448639 330 ntBASIC19.35■□□□□ 0.69
SCML4Q8N228 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC19.35■□□□□ 0.69
SCML4Q8N228 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC19.35■□□□□ 0.69
SCML4Q8N228 DFFB-212ENST00000625756 649 ntTSL 5 BASIC19.35■□□□□ 0.69
SCML4Q8N228 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC19.35■□□□□ 0.69
SCML4Q8N228 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
SCML4Q8N228 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SCML4Q8N228 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SCML4Q8N228 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC19.35■□□□□ 0.69
SCML4Q8N228 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SCML4Q8N228 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
SCML4Q8N228 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
SCML4Q8N228 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SCML4Q8N228 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC19.34■□□□□ 0.69
SCML4Q8N228 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SCML4Q8N228 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SCML4Q8N228 HBZP1-201ENST00000354915 429 ntBASIC19.34■□□□□ 0.69
SCML4Q8N228 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC19.34■□□□□ 0.69
SCML4Q8N228 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC19.34■□□□□ 0.69
SCML4Q8N228 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC19.34■□□□□ 0.69
SCML4Q8N228 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SCML4Q8N228 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC19.34■□□□□ 0.69
SCML4Q8N228 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
SCML4Q8N228 AC079602.3-201ENST00000623931 403 ntBASIC19.34■□□□□ 0.69
SCML4Q8N228 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SCML4Q8N228 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
SCML4Q8N228 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
SCML4Q8N228 AL499627.1-201ENST00000569373 2188 ntBASIC19.34■□□□□ 0.69
SCML4Q8N228 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SCML4Q8N228 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
SCML4Q8N228 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
SCML4Q8N228 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC19.34■□□□□ 0.69
SCML4Q8N228 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SCML4Q8N228 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SCML4Q8N228 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC19.33■□□□□ 0.69
SCML4Q8N228 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
SCML4Q8N228 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
SCML4Q8N228 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
SCML4Q8N228 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SCML4Q8N228 AL138781.2-201ENST00000617896 1843 ntBASIC19.33■□□□□ 0.69
SCML4Q8N228 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC19.33■□□□□ 0.69
SCML4Q8N228 AL031133.1-201ENST00000406807 723 ntBASIC19.33■□□□□ 0.68
SCML4Q8N228 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC19.33■□□□□ 0.68
SCML4Q8N228 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC19.33■□□□□ 0.68
SCML4Q8N228 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC19.33■□□□□ 0.68
SCML4Q8N228 REEP1-209ENST00000541910 969 ntTSL 2 BASIC19.33■□□□□ 0.68
SCML4Q8N228 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
SCML4Q8N228 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC19.33■□□□□ 0.68
SCML4Q8N228 FGF14-AS2-201ENST00000606448 1074 ntBASIC19.33■□□□□ 0.68
SCML4Q8N228 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC19.33■□□□□ 0.68
SCML4Q8N228 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms