Protein–RNA interactions for Protein: Q8IWZ5

TRIM42, Tripartite motif-containing protein 42, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42Q8IWZ5 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRIM42Q8IWZ5 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC18.6■□□□□ 0.57
TRIM42Q8IWZ5 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRIM42Q8IWZ5 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
TRIM42Q8IWZ5 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TRIM42Q8IWZ5 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC18.6■□□□□ 0.57
TRIM42Q8IWZ5 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC18.6■□□□□ 0.57
TRIM42Q8IWZ5 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRIM42Q8IWZ5 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC18.6■□□□□ 0.57
TRIM42Q8IWZ5 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRIM42Q8IWZ5 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRIM42Q8IWZ5 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
TRIM42Q8IWZ5 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC18.6■□□□□ 0.57
TRIM42Q8IWZ5 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC18.6■□□□□ 0.57
TRIM42Q8IWZ5 TREX2-204ENST00000370212 861 ntTSL 5 BASIC18.6■□□□□ 0.57
TRIM42Q8IWZ5 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
TRIM42Q8IWZ5 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
TRIM42Q8IWZ5 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
TRIM42Q8IWZ5 TSPY23P-201ENST00000440136 739 ntBASIC18.6■□□□□ 0.57
TRIM42Q8IWZ5 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRIM42Q8IWZ5 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC18.6■□□□□ 0.57
TRIM42Q8IWZ5 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
TRIM42Q8IWZ5 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TRIM42Q8IWZ5 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRIM42Q8IWZ5 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRIM42Q8IWZ5 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
TRIM42Q8IWZ5 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC18.59■□□□□ 0.57
TRIM42Q8IWZ5 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRIM42Q8IWZ5 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC18.59■□□□□ 0.57
TRIM42Q8IWZ5 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC18.59■□□□□ 0.57
TRIM42Q8IWZ5 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
TRIM42Q8IWZ5 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
TRIM42Q8IWZ5 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TRIM42Q8IWZ5 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
TRIM42Q8IWZ5 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRIM42Q8IWZ5 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
TRIM42Q8IWZ5 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRIM42Q8IWZ5 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC18.59■□□□□ 0.57
TRIM42Q8IWZ5 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRIM42Q8IWZ5 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
TRIM42Q8IWZ5 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC18.59■□□□□ 0.57
TRIM42Q8IWZ5 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
TRIM42Q8IWZ5 PPP1R14BP2-201ENST00000426284 444 ntBASIC18.59■□□□□ 0.57
TRIM42Q8IWZ5 ABHD17AP6-201ENST00000458502 1044 ntBASIC18.59■□□□□ 0.57
TRIM42Q8IWZ5 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC18.59■□□□□ 0.57
TRIM42Q8IWZ5 KLF13-207ENST00000560473 489 ntTSL 3 BASIC18.59■□□□□ 0.57
TRIM42Q8IWZ5 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC18.59■□□□□ 0.57
TRIM42Q8IWZ5 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
TRIM42Q8IWZ5 AC098934.4-201ENST00000564127 592 ntBASIC18.59■□□□□ 0.57
TRIM42Q8IWZ5 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRIM42Q8IWZ5 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TRIM42Q8IWZ5 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TRIM42Q8IWZ5 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
TRIM42Q8IWZ5 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TRIM42Q8IWZ5 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
TRIM42Q8IWZ5 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TRIM42Q8IWZ5 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRIM42Q8IWZ5 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRIM42Q8IWZ5 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
TRIM42Q8IWZ5 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
TRIM42Q8IWZ5 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
TRIM42Q8IWZ5 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC18.59■□□□□ 0.57
TRIM42Q8IWZ5 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRIM42Q8IWZ5 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
TRIM42Q8IWZ5 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRIM42Q8IWZ5 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TRIM42Q8IWZ5 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TRIM42Q8IWZ5 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC18.58■□□□□ 0.57
TRIM42Q8IWZ5 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
TRIM42Q8IWZ5 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
TRIM42Q8IWZ5 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC18.58■□□□□ 0.57
TRIM42Q8IWZ5 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
TRIM42Q8IWZ5 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC18.58■□□□□ 0.57
TRIM42Q8IWZ5 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TRIM42Q8IWZ5 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC18.58■□□□□ 0.57
TRIM42Q8IWZ5 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TRIM42Q8IWZ5 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
TRIM42Q8IWZ5 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TRIM42Q8IWZ5 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TRIM42Q8IWZ5 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
TRIM42Q8IWZ5 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC18.58■□□□□ 0.56
TRIM42Q8IWZ5 AL121829.2-201ENST00000620908 328 ntBASIC18.58■□□□□ 0.56
TRIM42Q8IWZ5 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
TRIM42Q8IWZ5 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
TRIM42Q8IWZ5 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.56
TRIM42Q8IWZ5 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC18.58■□□□□ 0.56
TRIM42Q8IWZ5 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TRIM42Q8IWZ5 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TRIM42Q8IWZ5 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TRIM42Q8IWZ5 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC18.58■□□□□ 0.56
TRIM42Q8IWZ5 AC112777.1-201ENST00000540175 1423 ntBASIC18.57■□□□□ 0.56
TRIM42Q8IWZ5 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRIM42Q8IWZ5 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC18.57■□□□□ 0.56
TRIM42Q8IWZ5 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRIM42Q8IWZ5 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC18.57■□□□□ 0.56
TRIM42Q8IWZ5 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TRIM42Q8IWZ5 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC18.57■□□□□ 0.56
TRIM42Q8IWZ5 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRIM42Q8IWZ5 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRIM42Q8IWZ5 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms