Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
CSMD3Q7Z407 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC12.95□□□□□ -0.34
CSMD3Q7Z407 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC12.95□□□□□ -0.34
CSMD3Q7Z407 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CSMD3Q7Z407 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC12.95□□□□□ -0.34
CSMD3Q7Z407 FIS1-203ENST00000442303 631 ntTSL 3 BASIC12.95□□□□□ -0.34
CSMD3Q7Z407 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC12.95□□□□□ -0.34
CSMD3Q7Z407 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CSMD3Q7Z407 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CSMD3Q7Z407 AC005336.2-201ENST00000593183 939 ntBASIC12.95□□□□□ -0.34
CSMD3Q7Z407 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC12.95□□□□□ -0.34
CSMD3Q7Z407 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
CSMD3Q7Z407 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC12.95□□□□□ -0.34
CSMD3Q7Z407 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC12.95□□□□□ -0.34
CSMD3Q7Z407 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
CSMD3Q7Z407 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC12.95□□□□□ -0.34
CSMD3Q7Z407 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC12.95□□□□□ -0.34
CSMD3Q7Z407 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
CSMD3Q7Z407 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CSMD3Q7Z407 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CSMD3Q7Z407 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CSMD3Q7Z407 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
CSMD3Q7Z407 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC12.95□□□□□ -0.34
CSMD3Q7Z407 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC12.95□□□□□ -0.34
CSMD3Q7Z407 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC12.95□□□□□ -0.34
CSMD3Q7Z407 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CSMD3Q7Z407 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC12.95□□□□□ -0.34
CSMD3Q7Z407 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CSMD3Q7Z407 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CSMD3Q7Z407 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC12.95□□□□□ -0.34
CSMD3Q7Z407 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CSMD3Q7Z407 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CSMD3Q7Z407 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CSMD3Q7Z407 AC073648.2-201ENST00000510116 352 ntBASIC12.95□□□□□ -0.34
CSMD3Q7Z407 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC12.95□□□□□ -0.34
CSMD3Q7Z407 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC12.95□□□□□ -0.34
CSMD3Q7Z407 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC12.94□□□□□ -0.34
CSMD3Q7Z407 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CSMD3Q7Z407 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CSMD3Q7Z407 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CSMD3Q7Z407 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CSMD3Q7Z407 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CSMD3Q7Z407 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
CSMD3Q7Z407 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CSMD3Q7Z407 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CSMD3Q7Z407 IMP4-203ENST00000409935 958 ntTSL 5 BASIC12.94□□□□□ -0.34
CSMD3Q7Z407 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC12.94□□□□□ -0.34
CSMD3Q7Z407 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CSMD3Q7Z407 GZMM-202ENST00000592501 941 ntTSL 3 BASIC12.94□□□□□ -0.34
CSMD3Q7Z407 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC12.94□□□□□ -0.34
CSMD3Q7Z407 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CSMD3Q7Z407 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CSMD3Q7Z407 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC12.94□□□□□ -0.34
CSMD3Q7Z407 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CSMD3Q7Z407 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CSMD3Q7Z407 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CSMD3Q7Z407 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC12.94□□□□□ -0.34
CSMD3Q7Z407 MED15P5-201ENST00000423150 992 ntBASIC12.94□□□□□ -0.34
CSMD3Q7Z407 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC12.94□□□□□ -0.34
CSMD3Q7Z407 AC104390.1-201ENST00000555663 520 ntBASIC12.94□□□□□ -0.34
CSMD3Q7Z407 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC12.94□□□□□ -0.34
CSMD3Q7Z407 AL591684.3-201ENST00000605187 298 ntBASIC12.94□□□□□ -0.34
CSMD3Q7Z407 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
CSMD3Q7Z407 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CSMD3Q7Z407 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CSMD3Q7Z407 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CSMD3Q7Z407 TP73-202ENST00000354437 2140 ntTSL 5 BASIC12.94□□□□□ -0.34
CSMD3Q7Z407 KRT8P7-201ENST00000533003 1432 ntBASIC12.94□□□□□ -0.34
CSMD3Q7Z407 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
CSMD3Q7Z407 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CSMD3Q7Z407 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CSMD3Q7Z407 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CSMD3Q7Z407 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC12.93□□□□□ -0.34
CSMD3Q7Z407 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CSMD3Q7Z407 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC12.93□□□□□ -0.34
CSMD3Q7Z407 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CSMD3Q7Z407 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
CSMD3Q7Z407 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CSMD3Q7Z407 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC12.93□□□□□ -0.34
CSMD3Q7Z407 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC12.93□□□□□ -0.34
CSMD3Q7Z407 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
CSMD3Q7Z407 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC12.93□□□□□ -0.34
CSMD3Q7Z407 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC12.93□□□□□ -0.34
CSMD3Q7Z407 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC12.93□□□□□ -0.34
CSMD3Q7Z407 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CSMD3Q7Z407 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CSMD3Q7Z407 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC12.93□□□□□ -0.34
CSMD3Q7Z407 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC12.93□□□□□ -0.34
CSMD3Q7Z407 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
CSMD3Q7Z407 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CSMD3Q7Z407 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
CSMD3Q7Z407 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC12.93□□□□□ -0.34
CSMD3Q7Z407 POM121L3P-201ENST00000419331 1163 ntBASIC12.93□□□□□ -0.34
CSMD3Q7Z407 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC12.93□□□□□ -0.34
CSMD3Q7Z407 MIR3197-201ENST00000582241 73 ntBASIC12.93□□□□□ -0.34
CSMD3Q7Z407 AC008608.2-201ENST00000606089 416 ntBASIC12.93□□□□□ -0.34
CSMD3Q7Z407 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CSMD3Q7Z407 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC12.93□□□□□ -0.34
CSMD3Q7Z407 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CSMD3Q7Z407 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms