Protein–RNA interactions for Protein: Q6S5L8

SHC4, SHC-transforming protein 4, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4Q6S5L8 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
SHC4Q6S5L8 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
SHC4Q6S5L8 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC21.06■□□□□ 0.96
SHC4Q6S5L8 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC21.06■□□□□ 0.96
SHC4Q6S5L8 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC21.06■□□□□ 0.96
SHC4Q6S5L8 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC21.06■□□□□ 0.96
SHC4Q6S5L8 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC21.05■□□□□ 0.96
SHC4Q6S5L8 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC21.05■□□□□ 0.96
SHC4Q6S5L8 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SHC4Q6S5L8 MIR564-202ENST00000385049 94 ntBASIC21.05■□□□□ 0.96
SHC4Q6S5L8 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SHC4Q6S5L8 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SHC4Q6S5L8 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC21.05■□□□□ 0.96
SHC4Q6S5L8 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC21.05■□□□□ 0.96
SHC4Q6S5L8 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC21.05■□□□□ 0.96
SHC4Q6S5L8 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC21.05■□□□□ 0.96
SHC4Q6S5L8 MIR4674-201ENST00000582457 87 ntBASIC21.05■□□□□ 0.96
SHC4Q6S5L8 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC21.05■□□□□ 0.96
SHC4Q6S5L8 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC21.05■□□□□ 0.96
SHC4Q6S5L8 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC21.05■□□□□ 0.96
SHC4Q6S5L8 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
SHC4Q6S5L8 ESPNP-201ENST00000270691 2015 ntBASIC21.05■□□□□ 0.96
SHC4Q6S5L8 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC21.05■□□□□ 0.96
SHC4Q6S5L8 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
SHC4Q6S5L8 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC21.05■□□□□ 0.96
SHC4Q6S5L8 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SHC4Q6S5L8 EML3-217ENST00000531557 2509 ntTSL 5 BASIC21.05■□□□□ 0.96
SHC4Q6S5L8 AC093677.2-201ENST00000600169 1863 ntBASIC21.05■□□□□ 0.96
SHC4Q6S5L8 MME-217ENST00000616757 1315 ntTSL 5 BASIC21.04■□□□□ 0.96
SHC4Q6S5L8 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SHC4Q6S5L8 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
SHC4Q6S5L8 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC21.04■□□□□ 0.96
SHC4Q6S5L8 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SHC4Q6S5L8 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
SHC4Q6S5L8 CD276-203ENST00000537340 2439 ntTSL 2 BASIC21.04■□□□□ 0.96
SHC4Q6S5L8 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
SHC4Q6S5L8 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SHC4Q6S5L8 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
SHC4Q6S5L8 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
SHC4Q6S5L8 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC21.04■□□□□ 0.96
SHC4Q6S5L8 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC21.04■□□□□ 0.96
SHC4Q6S5L8 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC21.04■□□□□ 0.96
SHC4Q6S5L8 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC21.04■□□□□ 0.96
SHC4Q6S5L8 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
SHC4Q6S5L8 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
SHC4Q6S5L8 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC21.04■□□□□ 0.96
SHC4Q6S5L8 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SHC4Q6S5L8 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SHC4Q6S5L8 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SHC4Q6S5L8 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SHC4Q6S5L8 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC21.04■□□□□ 0.96
SHC4Q6S5L8 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SHC4Q6S5L8 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
SHC4Q6S5L8 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC21.03■□□□□ 0.96
SHC4Q6S5L8 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SHC4Q6S5L8 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC21.03■□□□□ 0.96
SHC4Q6S5L8 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC21.03■□□□□ 0.96
SHC4Q6S5L8 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SHC4Q6S5L8 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
SHC4Q6S5L8 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SHC4Q6S5L8 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SHC4Q6S5L8 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC21.03■□□□□ 0.96
SHC4Q6S5L8 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SHC4Q6S5L8 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC21.03■□□□□ 0.96
SHC4Q6S5L8 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SHC4Q6S5L8 CFL2-205ENST00000555765 632 ntTSL 2 BASIC21.03■□□□□ 0.96
SHC4Q6S5L8 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
SHC4Q6S5L8 STX6-204ENST00000542060 4809 ntTSL 2 BASIC21.03■□□□□ 0.96
SHC4Q6S5L8 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC21.03■□□□□ 0.96
SHC4Q6S5L8 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SHC4Q6S5L8 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC21.03■□□□□ 0.96
SHC4Q6S5L8 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC21.03■□□□□ 0.96
SHC4Q6S5L8 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
SHC4Q6S5L8 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SHC4Q6S5L8 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SHC4Q6S5L8 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC21.02■□□□□ 0.96
SHC4Q6S5L8 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SHC4Q6S5L8 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
SHC4Q6S5L8 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC21.02■□□□□ 0.96
SHC4Q6S5L8 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SHC4Q6S5L8 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SHC4Q6S5L8 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SHC4Q6S5L8 PRR31-201ENST00000371629 978 ntTSL 2 BASIC21.02■□□□□ 0.96
SHC4Q6S5L8 MDFI-202ENST00000373050 809 ntTSL 2 BASIC21.02■□□□□ 0.96
SHC4Q6S5L8 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC21.02■□□□□ 0.96
SHC4Q6S5L8 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SHC4Q6S5L8 MCCD1P1-208ENST00000445732 328 ntBASIC21.02■□□□□ 0.96
SHC4Q6S5L8 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC21.02■□□□□ 0.96
SHC4Q6S5L8 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC21.02■□□□□ 0.96
SHC4Q6S5L8 AC026471.5-201ENST00000615068 467 ntBASIC21.02■□□□□ 0.96
SHC4Q6S5L8 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC21.02■□□□□ 0.96
SHC4Q6S5L8 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC21.02■□□□□ 0.96
SHC4Q6S5L8 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
SHC4Q6S5L8 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
SHC4Q6S5L8 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
SHC4Q6S5L8 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC21.02■□□□□ 0.95
SHC4Q6S5L8 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC21.02■□□□□ 0.95
SHC4Q6S5L8 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
SHC4Q6S5L8 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SHC4Q6S5L8 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms