Protein–RNA interactions for Protein: Q5GLZ8

HERC4, Probable E3 ubiquitin-protein ligase HERC4, humanhuman

Predicted RBP Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4Q5GLZ8 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
HERC4Q5GLZ8 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
HERC4Q5GLZ8 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC20.83■□□□□ 0.93
HERC4Q5GLZ8 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC20.83■□□□□ 0.93
HERC4Q5GLZ8 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
HERC4Q5GLZ8 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC20.83■□□□□ 0.93
HERC4Q5GLZ8 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
HERC4Q5GLZ8 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
HERC4Q5GLZ8 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
HERC4Q5GLZ8 NFYC-AS1-201ENST00000606277 1687 ntBASIC20.83■□□□□ 0.92
HERC4Q5GLZ8 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
HERC4Q5GLZ8 SNAI3-AS1-205ENST00000568633 2096 ntBASIC20.82■□□□□ 0.92
HERC4Q5GLZ8 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC20.82■□□□□ 0.92
HERC4Q5GLZ8 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
HERC4Q5GLZ8 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HERC4Q5GLZ8 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HERC4Q5GLZ8 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC20.82■□□□□ 0.92
HERC4Q5GLZ8 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC20.82■□□□□ 0.92
HERC4Q5GLZ8 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC20.82■□□□□ 0.92
HERC4Q5GLZ8 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HERC4Q5GLZ8 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC20.82■□□□□ 0.92
HERC4Q5GLZ8 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC20.82■□□□□ 0.92
HERC4Q5GLZ8 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC20.82■□□□□ 0.92
HERC4Q5GLZ8 AC063952.2-201ENST00000498792 1227 ntBASIC20.82■□□□□ 0.92
HERC4Q5GLZ8 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
HERC4Q5GLZ8 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HERC4Q5GLZ8 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HERC4Q5GLZ8 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
HERC4Q5GLZ8 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
HERC4Q5GLZ8 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HERC4Q5GLZ8 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
HERC4Q5GLZ8 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
HERC4Q5GLZ8 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC20.82■□□□□ 0.92
HERC4Q5GLZ8 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC20.81■□□□□ 0.92
HERC4Q5GLZ8 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC20.81■□□□□ 0.92
HERC4Q5GLZ8 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC20.81■□□□□ 0.92
HERC4Q5GLZ8 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
HERC4Q5GLZ8 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC20.81■□□□□ 0.92
HERC4Q5GLZ8 AK4P3-201ENST00000418260 669 ntBASIC20.81■□□□□ 0.92
HERC4Q5GLZ8 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC20.81■□□□□ 0.92
HERC4Q5GLZ8 MTMR9LP-203ENST00000426597 1545 ntBASIC20.81■□□□□ 0.92
HERC4Q5GLZ8 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
HERC4Q5GLZ8 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
HERC4Q5GLZ8 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
HERC4Q5GLZ8 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
HERC4Q5GLZ8 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
HERC4Q5GLZ8 ANO7L1-203ENST00000602586 1720 ntBASIC20.81■□□□□ 0.92
HERC4Q5GLZ8 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
HERC4Q5GLZ8 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
HERC4Q5GLZ8 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
HERC4Q5GLZ8 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC20.8■□□□□ 0.92
HERC4Q5GLZ8 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HERC4Q5GLZ8 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC20.8■□□□□ 0.92
HERC4Q5GLZ8 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HERC4Q5GLZ8 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HERC4Q5GLZ8 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HERC4Q5GLZ8 HIST1H2APS4-201ENST00000362070 348 ntBASIC20.8■□□□□ 0.92
HERC4Q5GLZ8 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
HERC4Q5GLZ8 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC20.8■□□□□ 0.92
HERC4Q5GLZ8 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC20.8■□□□□ 0.92
HERC4Q5GLZ8 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HERC4Q5GLZ8 AC009947.2-201ENST00000444014 672 ntBASIC20.8■□□□□ 0.92
HERC4Q5GLZ8 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC20.8■□□□□ 0.92
HERC4Q5GLZ8 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
HERC4Q5GLZ8 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC20.8■□□□□ 0.92
HERC4Q5GLZ8 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HERC4Q5GLZ8 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HERC4Q5GLZ8 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
HERC4Q5GLZ8 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
HERC4Q5GLZ8 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HERC4Q5GLZ8 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
HERC4Q5GLZ8 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
HERC4Q5GLZ8 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC20.8■□□□□ 0.92
HERC4Q5GLZ8 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC20.8■□□□□ 0.92
HERC4Q5GLZ8 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC20.8■□□□□ 0.92
HERC4Q5GLZ8 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HERC4Q5GLZ8 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
HERC4Q5GLZ8 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
HERC4Q5GLZ8 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
HERC4Q5GLZ8 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
HERC4Q5GLZ8 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC20.79■□□□□ 0.92
HERC4Q5GLZ8 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
HERC4Q5GLZ8 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC20.79■□□□□ 0.92
HERC4Q5GLZ8 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
HERC4Q5GLZ8 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
HERC4Q5GLZ8 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
HERC4Q5GLZ8 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
HERC4Q5GLZ8 SLC25A1P2-201ENST00000430693 912 ntBASIC20.79■□□□□ 0.92
HERC4Q5GLZ8 BX664615.1-201ENST00000443558 458 ntBASIC20.79■□□□□ 0.92
HERC4Q5GLZ8 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC20.79■□□□□ 0.92
HERC4Q5GLZ8 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC20.79■□□□□ 0.92
HERC4Q5GLZ8 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
HERC4Q5GLZ8 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC20.79■□□□□ 0.92
HERC4Q5GLZ8 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
HERC4Q5GLZ8 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC20.79■□□□□ 0.92
HERC4Q5GLZ8 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC20.79■□□□□ 0.92
HERC4Q5GLZ8 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
HERC4Q5GLZ8 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
HERC4Q5GLZ8 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC20.79■□□□□ 0.92
HERC4Q5GLZ8 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 69.5 ms