Protein–RNA interactions for Protein: Q05086

UBE3A, Ubiquitin-protein ligase E3A, humanhuman

Predictions only

Length 875 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3AQ05086 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
UBE3AQ05086 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
UBE3AQ05086 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC19.73■□□□□ 0.75
UBE3AQ05086 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
UBE3AQ05086 AC092667.1-201ENST00000434301 2586 ntBASIC19.73■□□□□ 0.75
UBE3AQ05086 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC19.73■□□□□ 0.75
UBE3AQ05086 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
UBE3AQ05086 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
UBE3AQ05086 NSUN5P1-202ENST00000421140 1535 ntBASIC19.72■□□□□ 0.75
UBE3AQ05086 NSUN5P2-203ENST00000457352 1529 ntBASIC19.72■□□□□ 0.75
UBE3AQ05086 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC19.72■□□□□ 0.75
UBE3AQ05086 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
UBE3AQ05086 AKR1C7P-201ENST00000305623 895 ntBASIC19.72■□□□□ 0.75
UBE3AQ05086 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
UBE3AQ05086 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC19.72■□□□□ 0.75
UBE3AQ05086 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC19.72■□□□□ 0.75
UBE3AQ05086 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC19.72■□□□□ 0.75
UBE3AQ05086 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
UBE3AQ05086 REEP1-209ENST00000541910 969 ntTSL 2 BASIC19.72■□□□□ 0.75
UBE3AQ05086 NAT14-202ENST00000587400 416 ntTSL 5 BASIC19.72■□□□□ 0.75
UBE3AQ05086 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC19.72■□□□□ 0.75
UBE3AQ05086 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
UBE3AQ05086 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
UBE3AQ05086 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
UBE3AQ05086 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
UBE3AQ05086 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
UBE3AQ05086 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
UBE3AQ05086 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC19.71■□□□□ 0.75
UBE3AQ05086 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
UBE3AQ05086 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
UBE3AQ05086 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
UBE3AQ05086 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
UBE3AQ05086 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
UBE3AQ05086 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
UBE3AQ05086 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC19.71■□□□□ 0.75
UBE3AQ05086 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
UBE3AQ05086 POM121L3P-201ENST00000419331 1163 ntBASIC19.71■□□□□ 0.75
UBE3AQ05086 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC19.71■□□□□ 0.75
UBE3AQ05086 CDV3-207ENST00000508481 661 ntTSL 3 BASIC19.71■□□□□ 0.75
UBE3AQ05086 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC19.71■□□□□ 0.75
UBE3AQ05086 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
UBE3AQ05086 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC19.71■□□□□ 0.75
UBE3AQ05086 ABR-217ENST00000572441 563 ntTSL 4 BASIC19.71■□□□□ 0.75
UBE3AQ05086 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC19.71■□□□□ 0.75
UBE3AQ05086 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC19.71■□□□□ 0.75
UBE3AQ05086 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC19.71■□□□□ 0.75
UBE3AQ05086 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
UBE3AQ05086 AC117500.6-201ENST00000624871 588 ntBASIC19.71■□□□□ 0.75
UBE3AQ05086 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
UBE3AQ05086 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19.71■□□□□ 0.75
UBE3AQ05086 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
UBE3AQ05086 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
UBE3AQ05086 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
UBE3AQ05086 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
UBE3AQ05086 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC19.71■□□□□ 0.75
UBE3AQ05086 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC19.71■□□□□ 0.75
UBE3AQ05086 AL353692.3-201ENST00000407031 1396 ntBASIC19.7■□□□□ 0.74
UBE3AQ05086 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
UBE3AQ05086 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
UBE3AQ05086 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
UBE3AQ05086 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC19.7■□□□□ 0.74
UBE3AQ05086 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
UBE3AQ05086 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
UBE3AQ05086 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
UBE3AQ05086 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
UBE3AQ05086 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC19.7■□□□□ 0.74
UBE3AQ05086 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC19.7■□□□□ 0.74
UBE3AQ05086 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC19.7■□□□□ 0.74
UBE3AQ05086 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC19.7■□□□□ 0.74
UBE3AQ05086 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
UBE3AQ05086 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
UBE3AQ05086 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
UBE3AQ05086 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
UBE3AQ05086 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
UBE3AQ05086 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC19.7■□□□□ 0.74
UBE3AQ05086 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
UBE3AQ05086 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
UBE3AQ05086 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC19.7■□□□□ 0.74
UBE3AQ05086 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC19.7■□□□□ 0.74
UBE3AQ05086 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
UBE3AQ05086 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
UBE3AQ05086 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC19.69■□□□□ 0.74
UBE3AQ05086 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
UBE3AQ05086 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
UBE3AQ05086 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
UBE3AQ05086 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC19.69■□□□□ 0.74
UBE3AQ05086 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
UBE3AQ05086 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
UBE3AQ05086 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
UBE3AQ05086 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
UBE3AQ05086 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC19.69■□□□□ 0.74
UBE3AQ05086 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
UBE3AQ05086 IGHV3OR16-7-201ENST00000604106 360 ntBASIC19.69■□□□□ 0.74
UBE3AQ05086 AC120114.3-201ENST00000611923 658 ntBASIC19.69■□□□□ 0.74
UBE3AQ05086 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
UBE3AQ05086 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC19.69■□□□□ 0.74
UBE3AQ05086 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC19.69■□□□□ 0.74
UBE3AQ05086 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.69■□□□□ 0.74
UBE3AQ05086 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
UBE3AQ05086 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms