Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC18■□□□□ 0.47
HMGCS1Q01581 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC18■□□□□ 0.47
HMGCS1Q01581 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC18■□□□□ 0.47
HMGCS1Q01581 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC18■□□□□ 0.47
HMGCS1Q01581 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC18■□□□□ 0.47
HMGCS1Q01581 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC18■□□□□ 0.47
HMGCS1Q01581 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC18■□□□□ 0.47
HMGCS1Q01581 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
HMGCS1Q01581 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC18■□□□□ 0.47
HMGCS1Q01581 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
HMGCS1Q01581 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC17.99■□□□□ 0.47
HMGCS1Q01581 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
HMGCS1Q01581 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HMGCS1Q01581 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
HMGCS1Q01581 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
HMGCS1Q01581 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
HMGCS1Q01581 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HMGCS1Q01581 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
HMGCS1Q01581 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC17.99■□□□□ 0.47
HMGCS1Q01581 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC17.99■□□□□ 0.47
HMGCS1Q01581 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC17.99■□□□□ 0.47
HMGCS1Q01581 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HMGCS1Q01581 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC17.99■□□□□ 0.47
HMGCS1Q01581 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC17.99■□□□□ 0.47
HMGCS1Q01581 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
HMGCS1Q01581 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC17.99■□□□□ 0.47
HMGCS1Q01581 AL133373.2-201ENST00000623187 2828 ntBASIC17.99■□□□□ 0.47
HMGCS1Q01581 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HMGCS1Q01581 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
HMGCS1Q01581 AR-207ENST00000612010 3896 ntTSL 5 BASIC17.99■□□□□ 0.47
HMGCS1Q01581 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC17.99■□□□□ 0.47
HMGCS1Q01581 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC17.99■□□□□ 0.47
HMGCS1Q01581 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
HMGCS1Q01581 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HMGCS1Q01581 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC17.99■□□□□ 0.47
HMGCS1Q01581 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HMGCS1Q01581 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
HMGCS1Q01581 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC17.98■□□□□ 0.47
HMGCS1Q01581 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC17.98■□□□□ 0.47
HMGCS1Q01581 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
HMGCS1Q01581 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
HMGCS1Q01581 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HMGCS1Q01581 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC17.98■□□□□ 0.47
HMGCS1Q01581 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HMGCS1Q01581 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HMGCS1Q01581 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HMGCS1Q01581 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
HMGCS1Q01581 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
HMGCS1Q01581 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
HMGCS1Q01581 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC17.98■□□□□ 0.47
HMGCS1Q01581 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC17.98■□□□□ 0.47
HMGCS1Q01581 CD177P1-201ENST00000606252 935 ntBASIC17.98■□□□□ 0.47
HMGCS1Q01581 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC17.98■□□□□ 0.47
HMGCS1Q01581 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
HMGCS1Q01581 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HMGCS1Q01581 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
HMGCS1Q01581 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HMGCS1Q01581 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
HMGCS1Q01581 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
HMGCS1Q01581 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
HMGCS1Q01581 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
HMGCS1Q01581 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC17.98■□□□□ 0.47
HMGCS1Q01581 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HMGCS1Q01581 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC17.98■□□□□ 0.47
HMGCS1Q01581 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
HMGCS1Q01581 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC17.97■□□□□ 0.47
HMGCS1Q01581 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
HMGCS1Q01581 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HMGCS1Q01581 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HMGCS1Q01581 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HMGCS1Q01581 CD276-201ENST00000318424 2738 ntTSL 5 BASIC17.97■□□□□ 0.47
HMGCS1Q01581 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC17.97■□□□□ 0.47
HMGCS1Q01581 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HMGCS1Q01581 AC079598.2-202ENST00000546624 1451 ntBASIC17.97■□□□□ 0.47
HMGCS1Q01581 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
HMGCS1Q01581 UBE2SP1-201ENST00000450587 669 ntBASIC17.97■□□□□ 0.47
HMGCS1Q01581 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC17.97■□□□□ 0.47
HMGCS1Q01581 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC17.97■□□□□ 0.47
HMGCS1Q01581 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
HMGCS1Q01581 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
HMGCS1Q01581 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
HMGCS1Q01581 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
HMGCS1Q01581 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HMGCS1Q01581 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HMGCS1Q01581 AC005332.8-201ENST00000622750 2735 ntBASIC17.97■□□□□ 0.47
HMGCS1Q01581 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
HMGCS1Q01581 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC17.97■□□□□ 0.47
HMGCS1Q01581 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HMGCS1Q01581 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HMGCS1Q01581 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HMGCS1Q01581 SRI-203ENST00000419179 1307 ntTSL 2 BASIC17.97■□□□□ 0.47
HMGCS1Q01581 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HMGCS1Q01581 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
HMGCS1Q01581 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HMGCS1Q01581 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.96■□□□□ 0.47
HMGCS1Q01581 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
HMGCS1Q01581 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC17.96■□□□□ 0.47
HMGCS1Q01581 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
HMGCS1Q01581 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HMGCS1Q01581 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms