Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 AC097488.1-201ENST00000507834 756 ntBASIC15.05■□□□□ -0
CX3CL1P78423 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC15.05■□□□□ -0
CX3CL1P78423 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC15.05■□□□□ -0
CX3CL1P78423 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC15.05■□□□□ -0
CX3CL1P78423 MIR4497-201ENST00000583208 89 ntBASIC15.05■□□□□ -0
CX3CL1P78423 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC15.05■□□□□ -0
CX3CL1P78423 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
CX3CL1P78423 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC15.05■□□□□ -0
CX3CL1P78423 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CX3CL1P78423 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CX3CL1P78423 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ -0
CX3CL1P78423 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
CX3CL1P78423 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC15.05■□□□□ -0
CX3CL1P78423 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
CX3CL1P78423 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC15.05■□□□□ -0
CX3CL1P78423 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC15.05■□□□□ -0
CX3CL1P78423 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CX3CL1P78423 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CX3CL1P78423 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC15.04■□□□□ -0
CX3CL1P78423 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC15.04■□□□□ -0
CX3CL1P78423 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
CX3CL1P78423 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC15.04■□□□□ -0
CX3CL1P78423 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
CX3CL1P78423 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
CX3CL1P78423 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC15.04■□□□□ -0
CX3CL1P78423 USP39-202ENST00000409025 1946 ntTSL 5 BASIC15.04■□□□□ -0
CX3CL1P78423 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC15.04■□□□□ -0
CX3CL1P78423 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC15.04■□□□□ -0
CX3CL1P78423 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC15.04■□□□□ -0
CX3CL1P78423 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CX3CL1P78423 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC15.04■□□□□ -0
CX3CL1P78423 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC15.04■□□□□ -0
CX3CL1P78423 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CX3CL1P78423 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CX3CL1P78423 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CX3CL1P78423 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC15.04■□□□□ -0
CX3CL1P78423 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC15.04■□□□□ -0
CX3CL1P78423 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
CX3CL1P78423 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC15.04■□□□□ -0
CX3CL1P78423 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC15.04■□□□□ -0
CX3CL1P78423 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC15.04■□□□□ -0
CX3CL1P78423 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC15.04■□□□□ -0
CX3CL1P78423 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC15.04■□□□□ -0
CX3CL1P78423 GRAMD4P8-201ENST00000605465 1115 ntBASIC15.04■□□□□ -0
CX3CL1P78423 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC15.04■□□□□ -0
CX3CL1P78423 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC15.04■□□□□ -0
CX3CL1P78423 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
CX3CL1P78423 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC15.04■□□□□ -0
CX3CL1P78423 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC15.04■□□□□ -0
CX3CL1P78423 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CX3CL1P78423 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC15.04■□□□□ -0
CX3CL1P78423 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CX3CL1P78423 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CX3CL1P78423 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
CX3CL1P78423 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC15.03■□□□□ -0
CX3CL1P78423 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CX3CL1P78423 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CX3CL1P78423 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
CX3CL1P78423 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC15.03■□□□□ -0
CX3CL1P78423 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC15.03■□□□□ -0
CX3CL1P78423 AC096733.2-201ENST00000609937 1394 ntBASIC15.03■□□□□ -0
CX3CL1P78423 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CX3CL1P78423 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC15.03■□□□□ -0
CX3CL1P78423 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
CX3CL1P78423 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC15.03■□□□□ -0
CX3CL1P78423 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC15.03■□□□□ -0
CX3CL1P78423 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CX3CL1P78423 UNC93B2-201ENST00000285383 730 ntBASIC15.03■□□□□ -0
CX3CL1P78423 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
CX3CL1P78423 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC15.03■□□□□ -0
CX3CL1P78423 CRYGFP-201ENST00000418459 633 ntBASIC15.03■□□□□ -0
CX3CL1P78423 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC15.03■□□□□ -0
CX3CL1P78423 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
CX3CL1P78423 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC15.03■□□□□ -0
CX3CL1P78423 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC15.03■□□□□ -0
CX3CL1P78423 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC15.03■□□□□ -0
CX3CL1P78423 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC15.03■□□□□ -0
CX3CL1P78423 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CX3CL1P78423 AC006333.2-201ENST00000607957 2099 ntBASIC15.03■□□□□ -0
CX3CL1P78423 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
CX3CL1P78423 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC15.03■□□□□ -0
CX3CL1P78423 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
CX3CL1P78423 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC15.03■□□□□ -0
CX3CL1P78423 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC15.03■□□□□ -0
CX3CL1P78423 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC15.03■□□□□ -0
CX3CL1P78423 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
CX3CL1P78423 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CX3CL1P78423 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CX3CL1P78423 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CX3CL1P78423 PCDHB18P-201ENST00000524813 2368 ntBASIC15.03■□□□□ -0
CX3CL1P78423 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
CX3CL1P78423 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
CX3CL1P78423 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
CX3CL1P78423 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC15.02■□□□□ -0
CX3CL1P78423 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CX3CL1P78423 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
CX3CL1P78423 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC15.02■□□□□ -0
CX3CL1P78423 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CX3CL1P78423 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CX3CL1P78423 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms