Protein–RNA interactions for Protein: P78348

ASIC1, Acid-sensing ion channel 1, humanhuman

Predictions only

Length 528 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ASIC1P78348 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
ASIC1P78348 AL109659.2-201ENST00000606809 1674 ntBASIC20.83■□□□□ 0.92
ASIC1P78348 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
ASIC1P78348 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
ASIC1P78348 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ASIC1P78348 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ASIC1P78348 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
ASIC1P78348 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ASIC1P78348 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ASIC1P78348 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC20.82■□□□□ 0.92
ASIC1P78348 AL390955.1-201ENST00000428694 934 ntBASIC20.82■□□□□ 0.92
ASIC1P78348 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC20.82■□□□□ 0.92
ASIC1P78348 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC20.82■□□□□ 0.92
ASIC1P78348 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC20.82■□□□□ 0.92
ASIC1P78348 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
ASIC1P78348 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
ASIC1P78348 ADK-206ENST00000541550 2222 ntTSL 2 BASIC20.82■□□□□ 0.92
ASIC1P78348 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC20.82■□□□□ 0.92
ASIC1P78348 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ASIC1P78348 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC20.82■□□□□ 0.92
ASIC1P78348 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ASIC1P78348 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ASIC1P78348 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
ASIC1P78348 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC20.82■□□□□ 0.92
ASIC1P78348 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
ASIC1P78348 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
ASIC1P78348 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ASIC1P78348 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
ASIC1P78348 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ASIC1P78348 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC20.81■□□□□ 0.92
ASIC1P78348 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC20.81■□□□□ 0.92
ASIC1P78348 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
ASIC1P78348 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ASIC1P78348 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
ASIC1P78348 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ASIC1P78348 PRR31-201ENST00000371629 978 ntTSL 2 BASIC20.81■□□□□ 0.92
ASIC1P78348 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ASIC1P78348 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC20.81■□□□□ 0.92
ASIC1P78348 MCCD1P1-208ENST00000445732 328 ntBASIC20.81■□□□□ 0.92
ASIC1P78348 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC20.81■□□□□ 0.92
ASIC1P78348 AL355075.4-201ENST00000554988 638 ntBASIC20.81■□□□□ 0.92
ASIC1P78348 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC20.81■□□□□ 0.92
ASIC1P78348 DET1-205ENST00000558413 583 ntTSL 4 BASIC20.81■□□□□ 0.92
ASIC1P78348 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC20.81■□□□□ 0.92
ASIC1P78348 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ASIC1P78348 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
ASIC1P78348 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
ASIC1P78348 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC20.81■□□□□ 0.92
ASIC1P78348 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ASIC1P78348 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC20.81■□□□□ 0.92
ASIC1P78348 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ASIC1P78348 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
ASIC1P78348 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ASIC1P78348 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
ASIC1P78348 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
ASIC1P78348 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ASIC1P78348 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ASIC1P78348 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ASIC1P78348 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
ASIC1P78348 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
ASIC1P78348 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC20.8■□□□□ 0.92
ASIC1P78348 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC20.8■□□□□ 0.92
ASIC1P78348 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
ASIC1P78348 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ASIC1P78348 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ASIC1P78348 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
ASIC1P78348 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ASIC1P78348 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC20.8■□□□□ 0.92
ASIC1P78348 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
ASIC1P78348 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
ASIC1P78348 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ASIC1P78348 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ASIC1P78348 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ASIC1P78348 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
ASIC1P78348 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC20.8■□□□□ 0.92
ASIC1P78348 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
ASIC1P78348 KRT17P2-201ENST00000300992 1314 ntBASIC20.79■□□□□ 0.92
ASIC1P78348 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC20.79■□□□□ 0.92
ASIC1P78348 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ASIC1P78348 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC20.79■□□□□ 0.92
ASIC1P78348 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
ASIC1P78348 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC20.79■□□□□ 0.92
ASIC1P78348 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ASIC1P78348 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ASIC1P78348 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
ASIC1P78348 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ASIC1P78348 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
ASIC1P78348 MIR1238-201ENST00000408483 83 ntBASIC20.79■□□□□ 0.92
ASIC1P78348 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC20.79■□□□□ 0.92
ASIC1P78348 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC20.79■□□□□ 0.92
ASIC1P78348 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
ASIC1P78348 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ASIC1P78348 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ASIC1P78348 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
ASIC1P78348 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ASIC1P78348 AC073592.3-201ENST00000625118 1834 ntBASIC20.78■□□□□ 0.92
ASIC1P78348 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
ASIC1P78348 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ASIC1P78348 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
ASIC1P78348 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms