Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
RPL39P62891 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RPL39P62891 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RPL39P62891 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC13.2□□□□□ -0.3
RPL39P62891 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC13.2□□□□□ -0.3
RPL39P62891 TUBB8P6-201ENST00000436895 1288 ntBASIC13.2□□□□□ -0.3
RPL39P62891 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC13.2□□□□□ -0.3
RPL39P62891 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
RPL39P62891 KRT18P16-201ENST00000510337 1294 ntBASIC13.2□□□□□ -0.3
RPL39P62891 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
RPL39P62891 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC13.2□□□□□ -0.3
RPL39P62891 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
RPL39P62891 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RPL39P62891 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC13.2□□□□□ -0.3
RPL39P62891 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RPL39P62891 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
RPL39P62891 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC13.2□□□□□ -0.3
RPL39P62891 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC13.2□□□□□ -0.3
RPL39P62891 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RPL39P62891 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
RPL39P62891 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
RPL39P62891 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
RPL39P62891 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
RPL39P62891 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
RPL39P62891 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
RPL39P62891 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
RPL39P62891 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
RPL39P62891 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
RPL39P62891 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RPL39P62891 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
RPL39P62891 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
RPL39P62891 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC13.19□□□□□ -0.3
RPL39P62891 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
RPL39P62891 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RPL39P62891 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
RPL39P62891 HEIH-201ENST00000623091 1652 ntBASIC13.19□□□□□ -0.3
RPL39P62891 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC13.19□□□□□ -0.3
RPL39P62891 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RPL39P62891 GAS2L1P1-201ENST00000420145 1480 ntBASIC13.19□□□□□ -0.3
RPL39P62891 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
RPL39P62891 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
RPL39P62891 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
RPL39P62891 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RPL39P62891 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
RPL39P62891 SERPINH1P1-201ENST00000419794 1249 ntBASIC13.19□□□□□ -0.3
RPL39P62891 AC006015.1-201ENST00000429970 570 ntBASIC13.19□□□□□ -0.3
RPL39P62891 TSPY21P-201ENST00000433481 731 ntBASIC13.19□□□□□ -0.3
RPL39P62891 PHB2-213ENST00000546111 858 ntTSL 2 BASIC13.19□□□□□ -0.3
RPL39P62891 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
RPL39P62891 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RPL39P62891 RAP2CP1-201ENST00000605103 478 ntBASIC13.19□□□□□ -0.3
RPL39P62891 PRORSD1P-202ENST00000563365 2154 ntBASIC13.19□□□□□ -0.3
RPL39P62891 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
RPL39P62891 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RPL39P62891 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RPL39P62891 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RPL39P62891 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC13.19□□□□□ -0.3
RPL39P62891 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
RPL39P62891 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RPL39P62891 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
RPL39P62891 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RPL39P62891 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
RPL39P62891 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
RPL39P62891 AC009053.2-201ENST00000563701 2365 ntBASIC13.18□□□□□ -0.3
RPL39P62891 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
RPL39P62891 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC13.18□□□□□ -0.3
RPL39P62891 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RPL39P62891 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RPL39P62891 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
RPL39P62891 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
RPL39P62891 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC13.18□□□□□ -0.3
RPL39P62891 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RPL39P62891 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
RPL39P62891 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RPL39P62891 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
RPL39P62891 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RPL39P62891 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
RPL39P62891 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
RPL39P62891 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
RPL39P62891 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
RPL39P62891 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC13.18□□□□□ -0.3
RPL39P62891 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
RPL39P62891 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
RPL39P62891 KRT18P5-201ENST00000436075 1291 ntBASIC13.18□□□□□ -0.3
RPL39P62891 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
RPL39P62891 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC13.18□□□□□ -0.3
RPL39P62891 PNN-205ENST00000556530 601 ntTSL 2 BASIC13.18□□□□□ -0.3
RPL39P62891 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
RPL39P62891 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC13.18□□□□□ -0.3
RPL39P62891 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
RPL39P62891 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
RPL39P62891 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RPL39P62891 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC13.18□□□□□ -0.3
RPL39P62891 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RPL39P62891 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RPL39P62891 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC13.18□□□□□ -0.3
RPL39P62891 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
RPL39P62891 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC13.18□□□□□ -0.3
RPL39P62891 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
RPL39P62891 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC13.18□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms