Protein–RNA interactions for Protein: P60059

SEC61G, Protein transport protein Sec61 subunit gamma, humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61GP60059 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC10.37□□□□□ -0.75
SEC61GP60059 GABPB1-201ENST00000220429 2726 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
SEC61GP60059 CIC-204ENST00000572681 8218 ntTSL 5 BASIC10.37□□□□□ -0.75
SEC61GP60059 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
SEC61GP60059 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC10.37□□□□□ -0.75
SEC61GP60059 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
SEC61GP60059 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
SEC61GP60059 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
SEC61GP60059 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC10.37□□□□□ -0.75
SEC61GP60059 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
SEC61GP60059 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
SEC61GP60059 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
SEC61GP60059 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
SEC61GP60059 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
SEC61GP60059 AC020907.5-201ENST00000624372 1936 ntBASIC10.37□□□□□ -0.75
SEC61GP60059 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC10.37□□□□□ -0.75
SEC61GP60059 CPEB4-208ENST00000520867 2607 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
SEC61GP60059 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
SEC61GP60059 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
SEC61GP60059 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
SEC61GP60059 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC10.36□□□□□ -0.75
SEC61GP60059 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
SEC61GP60059 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
SEC61GP60059 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
SEC61GP60059 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
SEC61GP60059 AC008741.2-201ENST00000612792 3115 ntBASIC10.36□□□□□ -0.75
SEC61GP60059 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
SEC61GP60059 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC10.36□□□□□ -0.75
SEC61GP60059 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
SEC61GP60059 CD34-203ENST00000367036 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
SEC61GP60059 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
SEC61GP60059 MYO7A-202ENST00000409709 7462 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
SEC61GP60059 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
SEC61GP60059 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
SEC61GP60059 AC009086.3-201ENST00000623486 1008 ntBASIC10.36□□□□□ -0.75
SEC61GP60059 AC087386.2-201ENST00000623212 4637 ntBASIC10.36□□□□□ -0.75
SEC61GP60059 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
SEC61GP60059 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
SEC61GP60059 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
SEC61GP60059 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
SEC61GP60059 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC10.36□□□□□ -0.75
SEC61GP60059 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
SEC61GP60059 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
SEC61GP60059 ST3GAL1-211ENST00000522652 2580 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
SEC61GP60059 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
SEC61GP60059 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC10.36□□□□□ -0.75
SEC61GP60059 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC10.36□□□□□ -0.75
SEC61GP60059 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
SEC61GP60059 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
SEC61GP60059 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
SEC61GP60059 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC10.36□□□□□ -0.75
SEC61GP60059 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
SEC61GP60059 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC10.36□□□□□ -0.75
SEC61GP60059 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
SEC61GP60059 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC10.36□□□□□ -0.75
SEC61GP60059 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
SEC61GP60059 CACNA1C-209ENST00000399603 7377 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
SEC61GP60059 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC10.35□□□□□ -0.75
SEC61GP60059 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
SEC61GP60059 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
SEC61GP60059 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC10.35□□□□□ -0.75
SEC61GP60059 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
SEC61GP60059 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC10.35□□□□□ -0.75
SEC61GP60059 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
SEC61GP60059 PFKM-201ENST00000312352 3078 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
SEC61GP60059 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC10.35□□□□□ -0.75
SEC61GP60059 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC10.35□□□□□ -0.75
SEC61GP60059 TNRC6C-205ENST00000588061 8419 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
SEC61GP60059 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
SEC61GP60059 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
SEC61GP60059 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
SEC61GP60059 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC10.35□□□□□ -0.75
SEC61GP60059 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
SEC61GP60059 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
SEC61GP60059 ARID4A-202ENST00000355431 5891 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
SEC61GP60059 TGM1-201ENST00000206765 2777 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
SEC61GP60059 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC10.35□□□□□ -0.75
SEC61GP60059 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC10.35□□□□□ -0.75
SEC61GP60059 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
SEC61GP60059 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
SEC61GP60059 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC10.35□□□□□ -0.75
SEC61GP60059 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
SEC61GP60059 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
SEC61GP60059 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
SEC61GP60059 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
SEC61GP60059 LINC00384-201ENST00000437721 6852 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
SEC61GP60059 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
SEC61GP60059 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
SEC61GP60059 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
SEC61GP60059 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
SEC61GP60059 AL592295.1-201ENST00000400984 884 ntBASIC10.35□□□□□ -0.75
SEC61GP60059 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC10.35□□□□□ -0.75
SEC61GP60059 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
SEC61GP60059 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC10.35□□□□□ -0.75
SEC61GP60059 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
SEC61GP60059 RIMBP2-201ENST00000261655 6321 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
SEC61GP60059 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
SEC61GP60059 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
SEC61GP60059 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
SEC61GP60059 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC10.35□□□□□ -0.75
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms