Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
FOXG1P55316 AP000523.1-201ENST00000398242 1049 ntBASIC16.34■□□□□ 0.21
FOXG1P55316 FAM8A6P-201ENST00000407496 1135 ntBASIC16.34■□□□□ 0.21
FOXG1P55316 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
FOXG1P55316 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
FOXG1P55316 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
FOXG1P55316 LTBR-211ENST00000543190 785 ntTSL 3 BASIC16.34■□□□□ 0.21
FOXG1P55316 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
FOXG1P55316 AL031432.5-201ENST00000641059 760 ntBASIC16.34■□□□□ 0.21
FOXG1P55316 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC16.34■□□□□ 0.21
FOXG1P55316 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
FOXG1P55316 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC16.34■□□□□ 0.21
FOXG1P55316 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
FOXG1P55316 TNXA-203ENST00000507684 2038 ntBASIC16.34■□□□□ 0.21
FOXG1P55316 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
FOXG1P55316 AC004408.2-201ENST00000623613 2777 ntBASIC16.34■□□□□ 0.21
FOXG1P55316 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
FOXG1P55316 AC005082.1-201ENST00000413042 2259 ntBASIC16.34■□□□□ 0.21
FOXG1P55316 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
FOXG1P55316 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
FOXG1P55316 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
FOXG1P55316 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC16.34■□□□□ 0.21
FOXG1P55316 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
FOXG1P55316 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
FOXG1P55316 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
FOXG1P55316 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC16.34■□□□□ 0.21
FOXG1P55316 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC16.33■□□□□ 0.21
FOXG1P55316 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
FOXG1P55316 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
FOXG1P55316 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC16.33■□□□□ 0.21
FOXG1P55316 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
FOXG1P55316 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
FOXG1P55316 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
FOXG1P55316 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC16.33■□□□□ 0.2
FOXG1P55316 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
FOXG1P55316 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
FOXG1P55316 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
FOXG1P55316 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC16.33■□□□□ 0.2
FOXG1P55316 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
FOXG1P55316 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC16.33■□□□□ 0.2
FOXG1P55316 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC16.33■□□□□ 0.2
FOXG1P55316 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
FOXG1P55316 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC16.33■□□□□ 0.2
FOXG1P55316 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
FOXG1P55316 NAT14-202ENST00000587400 416 ntTSL 5 BASIC16.33■□□□□ 0.2
FOXG1P55316 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
FOXG1P55316 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC16.33■□□□□ 0.2
FOXG1P55316 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
FOXG1P55316 AL590326.2-201ENST00000625139 305 ntBASIC16.33■□□□□ 0.2
FOXG1P55316 DFFB-212ENST00000625756 649 ntTSL 5 BASIC16.33■□□□□ 0.2
FOXG1P55316 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
FOXG1P55316 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
FOXG1P55316 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
FOXG1P55316 HOXB1-202ENST00000577092 1414 ntBASIC16.33■□□□□ 0.2
FOXG1P55316 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
FOXG1P55316 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
FOXG1P55316 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC16.33■□□□□ 0.2
FOXG1P55316 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
FOXG1P55316 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC16.33■□□□□ 0.2
FOXG1P55316 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC16.33■□□□□ 0.2
FOXG1P55316 ANO7L1-203ENST00000602586 1720 ntBASIC16.33■□□□□ 0.2
FOXG1P55316 AL031598.1-201ENST00000561511 1773 ntBASIC16.33■□□□□ 0.2
FOXG1P55316 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
FOXG1P55316 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
FOXG1P55316 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
FOXG1P55316 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
FOXG1P55316 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC16.33■□□□□ 0.2
FOXG1P55316 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
FOXG1P55316 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
FOXG1P55316 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC16.33■□□□□ 0.2
FOXG1P55316 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
FOXG1P55316 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
FOXG1P55316 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
FOXG1P55316 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
FOXG1P55316 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
FOXG1P55316 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
FOXG1P55316 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
FOXG1P55316 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
FOXG1P55316 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
FOXG1P55316 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
FOXG1P55316 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
FOXG1P55316 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
FOXG1P55316 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
FOXG1P55316 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC16.32■□□□□ 0.2
FOXG1P55316 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC16.32■□□□□ 0.2
FOXG1P55316 GRAMD4P1-201ENST00000435181 1110 ntBASIC16.32■□□□□ 0.2
FOXG1P55316 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC16.32■□□□□ 0.2
FOXG1P55316 AC092647.4-201ENST00000457211 535 ntBASIC16.32■□□□□ 0.2
FOXG1P55316 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
FOXG1P55316 KRT8P50-201ENST00000562022 1438 ntBASIC16.32■□□□□ 0.2
FOXG1P55316 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
FOXG1P55316 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
FOXG1P55316 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC16.32■□□□□ 0.2
FOXG1P55316 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC16.32■□□□□ 0.2
FOXG1P55316 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC16.32■□□□□ 0.2
FOXG1P55316 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC16.32■□□□□ 0.2
FOXG1P55316 AL157888.1-201ENST00000631930 593 ntBASIC16.32■□□□□ 0.2
FOXG1P55316 BX323043.1-201ENST00000641006 1765 ntBASIC16.32■□□□□ 0.2
FOXG1P55316 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
FOXG1P55316 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms