Protein–RNA interactions for Protein: P54760

EPHB4, Ephrin type-B receptor 4, humanhuman

Predictions only

Length 987 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4P54760 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC20.94■□□□□ 0.94
EPHB4P54760 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
EPHB4P54760 TREX1-205ENST00000625293 1783 ntBASIC20.94■□□□□ 0.94
EPHB4P54760 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
EPHB4P54760 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
EPHB4P54760 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
EPHB4P54760 KRT8P11-201ENST00000409686 1436 ntBASIC20.94■□□□□ 0.94
EPHB4P54760 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
EPHB4P54760 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
EPHB4P54760 AL691432.2-201ENST00000607222 2038 ntBASIC20.94■□□□□ 0.94
EPHB4P54760 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC20.94■□□□□ 0.94
EPHB4P54760 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC20.93■□□□□ 0.94
EPHB4P54760 CD37-204ENST00000535669 1674 ntTSL 2 BASIC20.93■□□□□ 0.94
EPHB4P54760 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC20.93■□□□□ 0.94
EPHB4P54760 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC20.93■□□□□ 0.94
EPHB4P54760 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
EPHB4P54760 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
EPHB4P54760 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
EPHB4P54760 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
EPHB4P54760 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
EPHB4P54760 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC20.93■□□□□ 0.94
EPHB4P54760 MPI-205ENST00000562606 1052 ntTSL 3 BASIC20.93■□□□□ 0.94
EPHB4P54760 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
EPHB4P54760 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC20.93■□□□□ 0.94
EPHB4P54760 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
EPHB4P54760 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC20.93■□□□□ 0.94
EPHB4P54760 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
EPHB4P54760 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
EPHB4P54760 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
EPHB4P54760 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
EPHB4P54760 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC20.93■□□□□ 0.94
EPHB4P54760 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC20.93■□□□□ 0.94
EPHB4P54760 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
EPHB4P54760 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC20.93■□□□□ 0.94
EPHB4P54760 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC20.93■□□□□ 0.94
EPHB4P54760 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC20.93■□□□□ 0.94
EPHB4P54760 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
EPHB4P54760 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
EPHB4P54760 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC20.92■□□□□ 0.94
EPHB4P54760 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
EPHB4P54760 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
EPHB4P54760 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC20.92■□□□□ 0.94
EPHB4P54760 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC20.92■□□□□ 0.94
EPHB4P54760 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
EPHB4P54760 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
EPHB4P54760 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
EPHB4P54760 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
EPHB4P54760 TSPY19P-201ENST00000418461 509 ntBASIC20.92■□□□□ 0.94
EPHB4P54760 TSPY18P-201ENST00000441642 509 ntBASIC20.92■□□□□ 0.94
EPHB4P54760 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
EPHB4P54760 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC20.92■□□□□ 0.94
EPHB4P54760 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC20.92■□□□□ 0.94
EPHB4P54760 AL160237.2-201ENST00000556165 472 ntBASIC20.92■□□□□ 0.94
EPHB4P54760 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
EPHB4P54760 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC20.92■□□□□ 0.94
EPHB4P54760 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
EPHB4P54760 Z82202.1-201ENST00000623446 1880 ntBASIC20.92■□□□□ 0.94
EPHB4P54760 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
EPHB4P54760 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
EPHB4P54760 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
EPHB4P54760 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
EPHB4P54760 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
EPHB4P54760 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
EPHB4P54760 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC20.91■□□□□ 0.94
EPHB4P54760 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC20.91■□□□□ 0.94
EPHB4P54760 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
EPHB4P54760 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
EPHB4P54760 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
EPHB4P54760 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
EPHB4P54760 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC20.91■□□□□ 0.94
EPHB4P54760 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
EPHB4P54760 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
EPHB4P54760 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC20.91■□□□□ 0.94
EPHB4P54760 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
EPHB4P54760 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC20.91■□□□□ 0.94
EPHB4P54760 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
EPHB4P54760 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC20.91■□□□□ 0.94
EPHB4P54760 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC20.91■□□□□ 0.94
EPHB4P54760 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC20.91■□□□□ 0.94
EPHB4P54760 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
EPHB4P54760 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC20.91■□□□□ 0.94
EPHB4P54760 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC20.91■□□□□ 0.94
EPHB4P54760 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
EPHB4P54760 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
EPHB4P54760 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
EPHB4P54760 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
EPHB4P54760 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
EPHB4P54760 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
EPHB4P54760 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
EPHB4P54760 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC20.9■□□□□ 0.94
EPHB4P54760 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
EPHB4P54760 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC20.9■□□□□ 0.94
EPHB4P54760 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
EPHB4P54760 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
EPHB4P54760 TBC1D3P2-202ENST00000577902 1649 ntBASIC20.9■□□□□ 0.94
EPHB4P54760 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
EPHB4P54760 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
EPHB4P54760 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
EPHB4P54760 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
EPHB4P54760 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms