Protein–RNA interactions for Protein: P51797

CLCN6, Chloride transport protein 6, humanhuman

Predictions only

Length 869 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6P51797 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC20.21■□□□□ 0.83
CLCN6P51797 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC20.21■□□□□ 0.83
CLCN6P51797 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CLCN6P51797 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC20.21■□□□□ 0.83
CLCN6P51797 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CLCN6P51797 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.83
CLCN6P51797 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CLCN6P51797 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CLCN6P51797 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CLCN6P51797 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CLCN6P51797 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
CLCN6P51797 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CLCN6P51797 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC20.2■□□□□ 0.82
CLCN6P51797 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CLCN6P51797 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC20.2■□□□□ 0.82
CLCN6P51797 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CLCN6P51797 Z97985.1-201ENST00000332270 946 ntBASIC20.2■□□□□ 0.82
CLCN6P51797 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CLCN6P51797 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
CLCN6P51797 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC20.2■□□□□ 0.82
CLCN6P51797 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
CLCN6P51797 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC20.2■□□□□ 0.82
CLCN6P51797 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC20.2■□□□□ 0.82
CLCN6P51797 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC20.2■□□□□ 0.82
CLCN6P51797 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CLCN6P51797 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
CLCN6P51797 AC110285.5-201ENST00000611501 352 ntBASIC20.2■□□□□ 0.82
CLCN6P51797 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
CLCN6P51797 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CLCN6P51797 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CLCN6P51797 AC116351.2-201ENST00000606540 1585 ntBASIC20.2■□□□□ 0.82
CLCN6P51797 AC073592.3-201ENST00000625118 1834 ntBASIC20.2■□□□□ 0.82
CLCN6P51797 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CLCN6P51797 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CLCN6P51797 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CLCN6P51797 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CLCN6P51797 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CLCN6P51797 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC20.19■□□□□ 0.82
CLCN6P51797 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CLCN6P51797 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CLCN6P51797 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CLCN6P51797 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
CLCN6P51797 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
CLCN6P51797 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CLCN6P51797 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC20.19■□□□□ 0.82
CLCN6P51797 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CLCN6P51797 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC20.19■□□□□ 0.82
CLCN6P51797 RHOD-202ENST00000532559 538 ntTSL 3 BASIC20.19■□□□□ 0.82
CLCN6P51797 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC20.19■□□□□ 0.82
CLCN6P51797 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC20.19■□□□□ 0.82
CLCN6P51797 AC004223.2-201ENST00000590309 544 ntBASIC20.19■□□□□ 0.82
CLCN6P51797 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CLCN6P51797 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
CLCN6P51797 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
CLCN6P51797 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CLCN6P51797 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CLCN6P51797 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC20.19■□□□□ 0.82
CLCN6P51797 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC20.19■□□□□ 0.82
CLCN6P51797 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CLCN6P51797 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CLCN6P51797 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CLCN6P51797 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
CLCN6P51797 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC20.18■□□□□ 0.82
CLCN6P51797 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC20.18■□□□□ 0.82
CLCN6P51797 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC20.18■□□□□ 0.82
CLCN6P51797 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC20.18■□□□□ 0.82
CLCN6P51797 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CLCN6P51797 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CLCN6P51797 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CLCN6P51797 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
CLCN6P51797 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC20.18■□□□□ 0.82
CLCN6P51797 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
CLCN6P51797 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
CLCN6P51797 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
CLCN6P51797 KRASP1-201ENST00000407852 552 ntBASIC20.18■□□□□ 0.82
CLCN6P51797 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CLCN6P51797 HNRNPA1P40-201ENST00000426371 1278 ntBASIC20.18■□□□□ 0.82
CLCN6P51797 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC20.18■□□□□ 0.82
CLCN6P51797 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC20.18■□□□□ 0.82
CLCN6P51797 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC20.18■□□□□ 0.82
CLCN6P51797 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC20.18■□□□□ 0.82
CLCN6P51797 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC20.18■□□□□ 0.82
CLCN6P51797 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC20.18■□□□□ 0.82
CLCN6P51797 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
CLCN6P51797 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CLCN6P51797 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CLCN6P51797 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CLCN6P51797 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CLCN6P51797 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CLCN6P51797 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CLCN6P51797 AC084018.2-201ENST00000613093 2607 ntBASIC20.18■□□□□ 0.82
CLCN6P51797 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC20.18■□□□□ 0.82
CLCN6P51797 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC20.18■□□□□ 0.82
CLCN6P51797 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC20.18■□□□□ 0.82
CLCN6P51797 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC20.17■□□□□ 0.82
CLCN6P51797 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC20.17■□□□□ 0.82
CLCN6P51797 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
CLCN6P51797 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CLCN6P51797 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CLCN6P51797 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms