Protein–RNA interactions for Protein: P48764

SLC9A3, Sodium/hydrogen exchanger 3, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC9A3P48764 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC17.11■□□□□ 0.33
SLC9A3P48764 AC124016.1-201ENST00000609552 612 ntBASIC17.11■□□□□ 0.33
SLC9A3P48764 AC110285.5-201ENST00000611501 352 ntBASIC17.11■□□□□ 0.33
SLC9A3P48764 AC131212.4-201ENST00000623606 975 ntBASIC17.11■□□□□ 0.33
SLC9A3P48764 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC9A3P48764 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
SLC9A3P48764 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC9A3P48764 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
SLC9A3P48764 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC17.11■□□□□ 0.33
SLC9A3P48764 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC9A3P48764 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC9A3P48764 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
SLC9A3P48764 AC011270.2-201ENST00000624293 2550 ntBASIC17.11■□□□□ 0.33
SLC9A3P48764 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
SLC9A3P48764 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
SLC9A3P48764 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC17.11■□□□□ 0.33
SLC9A3P48764 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC9A3P48764 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SLC9A3P48764 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC9A3P48764 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC9A3P48764 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC9A3P48764 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC9A3P48764 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SLC9A3P48764 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
SLC9A3P48764 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC9A3P48764 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
SLC9A3P48764 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
SLC9A3P48764 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC9A3P48764 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SLC9A3P48764 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC9A3P48764 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SLC9A3P48764 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC9A3P48764 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC17.1■□□□□ 0.33
SLC9A3P48764 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC17.1■□□□□ 0.33
SLC9A3P48764 ESRRAP1-201ENST00000400596 1257 ntBASIC17.1■□□□□ 0.33
SLC9A3P48764 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC9A3P48764 POU5F1P3-201ENST00000428824 1078 ntBASIC17.1■□□□□ 0.33
SLC9A3P48764 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SLC9A3P48764 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SLC9A3P48764 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC9A3P48764 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC9A3P48764 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC17.1■□□□□ 0.33
SLC9A3P48764 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC17.1■□□□□ 0.33
SLC9A3P48764 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC17.1■□□□□ 0.33
SLC9A3P48764 TBCB-214ENST00000629269 413 ntTSL 5 BASIC17.1■□□□□ 0.33
SLC9A3P48764 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC9A3P48764 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SLC9A3P48764 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SLC9A3P48764 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC9A3P48764 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC17.1■□□□□ 0.33
SLC9A3P48764 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC9A3P48764 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC9A3P48764 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC9A3P48764 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC9A3P48764 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
SLC9A3P48764 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC17.1■□□□□ 0.33
SLC9A3P48764 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SLC9A3P48764 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC17.1■□□□□ 0.33
SLC9A3P48764 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC17.1■□□□□ 0.33
SLC9A3P48764 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SLC9A3P48764 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
SLC9A3P48764 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLC9A3P48764 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLC9A3P48764 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
SLC9A3P48764 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC17.09■□□□□ 0.33
SLC9A3P48764 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLC9A3P48764 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLC9A3P48764 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLC9A3P48764 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLC9A3P48764 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLC9A3P48764 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
SLC9A3P48764 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLC9A3P48764 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
SLC9A3P48764 PRSS44-201ENST00000515154 1146 ntBASIC17.09■□□□□ 0.33
SLC9A3P48764 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC17.09■□□□□ 0.33
SLC9A3P48764 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC17.09■□□□□ 0.33
SLC9A3P48764 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC17.09■□□□□ 0.33
SLC9A3P48764 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SLC9A3P48764 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC17.09■□□□□ 0.33
SLC9A3P48764 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC17.09■□□□□ 0.33
SLC9A3P48764 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLC9A3P48764 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SLC9A3P48764 KATNBL1P6-202ENST00000562413 1466 ntBASIC17.09■□□□□ 0.33
SLC9A3P48764 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLC9A3P48764 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SLC9A3P48764 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SLC9A3P48764 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLC9A3P48764 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLC9A3P48764 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
SLC9A3P48764 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLC9A3P48764 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SLC9A3P48764 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
SLC9A3P48764 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLC9A3P48764 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.08■□□□□ 0.33
SLC9A3P48764 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SLC9A3P48764 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SLC9A3P48764 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC17.08■□□□□ 0.33
SLC9A3P48764 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SLC9A3P48764 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC17.08■□□□□ 0.33
SLC9A3P48764 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms