Protein–RNA interactions for Protein: P48730

CSNK1D, Casein kinase I isoform delta, humanhuman

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1DP48730 NTF6B-201ENST00000591913 560 ntBASIC18.69■□□□□ 0.58
CSNK1DP48730 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC18.69■□□□□ 0.58
CSNK1DP48730 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC18.69■□□□□ 0.58
CSNK1DP48730 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CSNK1DP48730 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
CSNK1DP48730 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CSNK1DP48730 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
CSNK1DP48730 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CSNK1DP48730 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CSNK1DP48730 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CSNK1DP48730 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CSNK1DP48730 AC098818.2-201ENST00000564925 2320 ntBASIC18.68■□□□□ 0.58
CSNK1DP48730 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC18.68■□□□□ 0.58
CSNK1DP48730 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CSNK1DP48730 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC18.68■□□□□ 0.58
CSNK1DP48730 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
CSNK1DP48730 TNXA-203ENST00000507684 2038 ntBASIC18.68■□□□□ 0.58
CSNK1DP48730 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CSNK1DP48730 LY6E-213ENST00000522528 606 ntTSL 3 BASIC18.68■□□□□ 0.58
CSNK1DP48730 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CSNK1DP48730 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
CSNK1DP48730 HYMAI.1-201ENST00000620949 238 ntBASIC18.68■□□□□ 0.58
CSNK1DP48730 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC18.68■□□□□ 0.58
CSNK1DP48730 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CSNK1DP48730 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CSNK1DP48730 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CSNK1DP48730 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC18.68■□□□□ 0.58
CSNK1DP48730 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CSNK1DP48730 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
CSNK1DP48730 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18.67■□□□□ 0.58
CSNK1DP48730 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC18.67■□□□□ 0.58
CSNK1DP48730 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
CSNK1DP48730 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CSNK1DP48730 SNCG-201ENST00000348795 684 ntTSL 2 BASIC18.67■□□□□ 0.58
CSNK1DP48730 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CSNK1DP48730 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC18.67■□□□□ 0.58
CSNK1DP48730 MIR149-201ENST00000384879 89 ntBASIC18.67■□□□□ 0.58
CSNK1DP48730 PVRIG2P-201ENST00000435460 978 ntBASIC18.67■□□□□ 0.58
CSNK1DP48730 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CSNK1DP48730 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC18.67■□□□□ 0.58
CSNK1DP48730 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
CSNK1DP48730 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC18.67■□□□□ 0.58
CSNK1DP48730 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC18.67■□□□□ 0.58
CSNK1DP48730 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CSNK1DP48730 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
CSNK1DP48730 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CSNK1DP48730 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CSNK1DP48730 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CSNK1DP48730 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CSNK1DP48730 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
CSNK1DP48730 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CSNK1DP48730 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CSNK1DP48730 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC18.67■□□□□ 0.58
CSNK1DP48730 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CSNK1DP48730 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
CSNK1DP48730 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CSNK1DP48730 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CSNK1DP48730 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CSNK1DP48730 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
CSNK1DP48730 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CSNK1DP48730 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CSNK1DP48730 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CSNK1DP48730 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC18.66■□□□□ 0.58
CSNK1DP48730 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CSNK1DP48730 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CSNK1DP48730 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC18.66■□□□□ 0.58
CSNK1DP48730 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CSNK1DP48730 AC112907.2-201ENST00000448639 330 ntBASIC18.66■□□□□ 0.58
CSNK1DP48730 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC18.66■□□□□ 0.58
CSNK1DP48730 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CSNK1DP48730 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC18.66■□□□□ 0.58
CSNK1DP48730 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC18.66■□□□□ 0.58
CSNK1DP48730 DFFB-212ENST00000625756 649 ntTSL 5 BASIC18.66■□□□□ 0.58
CSNK1DP48730 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CSNK1DP48730 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC18.66■□□□□ 0.58
CSNK1DP48730 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CSNK1DP48730 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CSNK1DP48730 MED25-212ENST00000618715 1467 ntTSL 5 BASIC18.65■□□□□ 0.58
CSNK1DP48730 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CSNK1DP48730 AL499627.1-201ENST00000569373 2188 ntBASIC18.65■□□□□ 0.58
CSNK1DP48730 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CSNK1DP48730 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
CSNK1DP48730 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CSNK1DP48730 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CSNK1DP48730 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC18.65■□□□□ 0.58
CSNK1DP48730 COPE-203ENST00000351079 907 ntTSL 2 BASIC18.65■□□□□ 0.58
CSNK1DP48730 AL031133.1-201ENST00000406807 723 ntBASIC18.65■□□□□ 0.58
CSNK1DP48730 HLA-F-220ENST00000434407 884 ntBASIC18.65■□□□□ 0.58
CSNK1DP48730 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC18.65■□□□□ 0.58
CSNK1DP48730 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CSNK1DP48730 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC18.65■□□□□ 0.58
CSNK1DP48730 KRT18P35-201ENST00000510488 1269 ntBASIC18.65■□□□□ 0.58
CSNK1DP48730 RMI2-205ENST00000576027 818 ntTSL 2 BASIC18.65■□□□□ 0.58
CSNK1DP48730 FGF14-AS2-201ENST00000606448 1074 ntBASIC18.65■□□□□ 0.58
CSNK1DP48730 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC18.65■□□□□ 0.58
CSNK1DP48730 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CSNK1DP48730 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC18.65■□□□□ 0.58
CSNK1DP48730 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CSNK1DP48730 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CSNK1DP48730 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms