Protein–RNA interactions for Protein: P48444

ARCN1, Coatomer subunit delta, humanhuman

Known RBP Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARCN1P48444 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC18.7■□□□□ 0.58
ARCN1P48444 AC133561.5-201ENST00000635547 218 ntBASIC18.7■□□□□ 0.58
ARCN1P48444 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC18.7■□□□□ 0.58
ARCN1P48444 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC18.7■□□□□ 0.58
ARCN1P48444 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ARCN1P48444 AL390961.4-201ENST00000623958 2535 ntBASIC18.7■□□□□ 0.58
ARCN1P48444 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC18.7■□□□□ 0.58
ARCN1P48444 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ARCN1P48444 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ARCN1P48444 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ARCN1P48444 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ARCN1P48444 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC18.7■□□□□ 0.58
ARCN1P48444 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ARCN1P48444 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
ARCN1P48444 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ARCN1P48444 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
ARCN1P48444 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC18.69■□□□□ 0.58
ARCN1P48444 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
ARCN1P48444 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ARCN1P48444 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ARCN1P48444 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ARCN1P48444 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ARCN1P48444 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ARCN1P48444 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
ARCN1P48444 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC18.69■□□□□ 0.58
ARCN1P48444 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
ARCN1P48444 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC18.69■□□□□ 0.58
ARCN1P48444 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
ARCN1P48444 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC18.69■□□□□ 0.58
ARCN1P48444 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC18.69■□□□□ 0.58
ARCN1P48444 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
ARCN1P48444 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC18.69■□□□□ 0.58
ARCN1P48444 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC18.69■□□□□ 0.58
ARCN1P48444 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC18.69■□□□□ 0.58
ARCN1P48444 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC18.69■□□□□ 0.58
ARCN1P48444 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ARCN1P48444 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC18.69■□□□□ 0.58
ARCN1P48444 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ARCN1P48444 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ARCN1P48444 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
ARCN1P48444 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ARCN1P48444 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ARCN1P48444 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC18.69■□□□□ 0.58
ARCN1P48444 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC18.68■□□□□ 0.58
ARCN1P48444 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ARCN1P48444 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ARCN1P48444 AC112777.1-201ENST00000540175 1423 ntBASIC18.68■□□□□ 0.58
ARCN1P48444 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ARCN1P48444 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
ARCN1P48444 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
ARCN1P48444 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ARCN1P48444 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
ARCN1P48444 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
ARCN1P48444 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ARCN1P48444 AL023284.2-201ENST00000405850 579 ntBASIC18.68■□□□□ 0.58
ARCN1P48444 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC18.68■□□□□ 0.58
ARCN1P48444 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC18.68■□□□□ 0.58
ARCN1P48444 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC18.68■□□□□ 0.58
ARCN1P48444 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ARCN1P48444 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC18.68■□□□□ 0.58
ARCN1P48444 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC18.68■□□□□ 0.58
ARCN1P48444 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ARCN1P48444 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC18.68■□□□□ 0.58
ARCN1P48444 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ARCN1P48444 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
ARCN1P48444 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC18.68■□□□□ 0.58
ARCN1P48444 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
ARCN1P48444 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
ARCN1P48444 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
ARCN1P48444 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ARCN1P48444 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.67■□□□□ 0.58
ARCN1P48444 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC18.67■□□□□ 0.58
ARCN1P48444 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC18.67■□□□□ 0.58
ARCN1P48444 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
ARCN1P48444 GPAT2P1-201ENST00000444924 1672 ntBASIC18.67■□□□□ 0.58
ARCN1P48444 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC18.67■□□□□ 0.58
ARCN1P48444 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ARCN1P48444 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ARCN1P48444 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC18.67■□□□□ 0.58
ARCN1P48444 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
ARCN1P48444 MMP23A-201ENST00000234610 1017 ntBASIC18.67■□□□□ 0.58
ARCN1P48444 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ARCN1P48444 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ARCN1P48444 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
ARCN1P48444 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
ARCN1P48444 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
ARCN1P48444 CA15P1-201ENST00000481698 905 ntBASIC18.67■□□□□ 0.58
ARCN1P48444 KRT18P41-201ENST00000518924 1277 ntBASIC18.67■□□□□ 0.58
ARCN1P48444 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ARCN1P48444 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
ARCN1P48444 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
ARCN1P48444 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC18.67■□□□□ 0.58
ARCN1P48444 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC18.67■□□□□ 0.58
ARCN1P48444 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
ARCN1P48444 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ARCN1P48444 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC18.66■□□□□ 0.58
ARCN1P48444 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ARCN1P48444 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
ARCN1P48444 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ARCN1P48444 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms