Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
MMP13P45452 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
MMP13P45452 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
MMP13P45452 KRT17P2-201ENST00000300992 1314 ntBASIC19.42■□□□□ 0.7
MMP13P45452 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC19.42■□□□□ 0.7
MMP13P45452 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
MMP13P45452 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC19.42■□□□□ 0.7
MMP13P45452 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
MMP13P45452 FEM1AP3-201ENST00000403722 1741 ntBASIC19.42■□□□□ 0.7
MMP13P45452 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
MMP13P45452 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
MMP13P45452 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC19.41■□□□□ 0.7
MMP13P45452 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
MMP13P45452 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
MMP13P45452 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
MMP13P45452 ABALON-201ENST00000629058 1903 ntBASIC19.41■□□□□ 0.7
MMP13P45452 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
MMP13P45452 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
MMP13P45452 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
MMP13P45452 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
MMP13P45452 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC19.41■□□□□ 0.7
MMP13P45452 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
MMP13P45452 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC19.41■□□□□ 0.7
MMP13P45452 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC19.41■□□□□ 0.7
MMP13P45452 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC19.41■□□□□ 0.7
MMP13P45452 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
MMP13P45452 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
MMP13P45452 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
MMP13P45452 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
MMP13P45452 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC19.41■□□□□ 0.7
MMP13P45452 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
MMP13P45452 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
MMP13P45452 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
MMP13P45452 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
MMP13P45452 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
MMP13P45452 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
MMP13P45452 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC19.4■□□□□ 0.7
MMP13P45452 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC19.4■□□□□ 0.7
MMP13P45452 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC19.4■□□□□ 0.7
MMP13P45452 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC19.4■□□□□ 0.7
MMP13P45452 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
MMP13P45452 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC19.4■□□□□ 0.7
MMP13P45452 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
MMP13P45452 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
MMP13P45452 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC19.4■□□□□ 0.7
MMP13P45452 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC19.4■□□□□ 0.7
MMP13P45452 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
MMP13P45452 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
MMP13P45452 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
MMP13P45452 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
MMP13P45452 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
MMP13P45452 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC19.4■□□□□ 0.7
MMP13P45452 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
MMP13P45452 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC19.4■□□□□ 0.7
MMP13P45452 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
MMP13P45452 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.7
MMP13P45452 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
MMP13P45452 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
MMP13P45452 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
MMP13P45452 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
MMP13P45452 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
MMP13P45452 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
MMP13P45452 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
MMP13P45452 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC19.39■□□□□ 0.69
MMP13P45452 AL596275.1-201ENST00000423464 877 ntBASIC19.39■□□□□ 0.69
MMP13P45452 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
MMP13P45452 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC19.39■□□□□ 0.69
MMP13P45452 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC19.39■□□□□ 0.69
MMP13P45452 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC19.39■□□□□ 0.69
MMP13P45452 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC19.39■□□□□ 0.69
MMP13P45452 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC19.39■□□□□ 0.69
MMP13P45452 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC19.39■□□□□ 0.69
MMP13P45452 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC19.39■□□□□ 0.69
MMP13P45452 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC19.39■□□□□ 0.69
MMP13P45452 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC19.39■□□□□ 0.69
MMP13P45452 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.69
MMP13P45452 FZD10-202ENST00000539839 3282 ntBASIC19.39■□□□□ 0.69
MMP13P45452 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC19.39■□□□□ 0.69
MMP13P45452 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
MMP13P45452 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC19.39■□□□□ 0.69
MMP13P45452 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
MMP13P45452 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
MMP13P45452 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
MMP13P45452 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
MMP13P45452 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
MMP13P45452 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
MMP13P45452 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.38■□□□□ 0.69
MMP13P45452 CD276-201ENST00000318424 2738 ntTSL 5 BASIC19.38■□□□□ 0.69
MMP13P45452 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
MMP13P45452 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
MMP13P45452 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
MMP13P45452 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
MMP13P45452 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
MMP13P45452 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
MMP13P45452 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.38■□□□□ 0.69
MMP13P45452 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC19.38■□□□□ 0.69
MMP13P45452 RBM17P1-201ENST00000453646 1190 ntBASIC19.38■□□□□ 0.69
MMP13P45452 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC19.38■□□□□ 0.69
MMP13P45452 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC19.38■□□□□ 0.69
MMP13P45452 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms