Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
NKX2-1P43699 SLC25A6P5-201ENST00000435663 894 ntBASIC15.28■□□□□ 0.04
NKX2-1P43699 TUBB8P6-201ENST00000436895 1288 ntBASIC15.28■□□□□ 0.04
NKX2-1P43699 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
NKX2-1P43699 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
NKX2-1P43699 RPS2P52-201ENST00000469610 820 ntBASIC15.28■□□□□ 0.04
NKX2-1P43699 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
NKX2-1P43699 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC15.28■□□□□ 0.04
NKX2-1P43699 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC15.28■□□□□ 0.04
NKX2-1P43699 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC15.28■□□□□ 0.04
NKX2-1P43699 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
NKX2-1P43699 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
NKX2-1P43699 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC15.28■□□□□ 0.04
NKX2-1P43699 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC15.28■□□□□ 0.04
NKX2-1P43699 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NKX2-1P43699 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
NKX2-1P43699 GOLGA6L5P-202ENST00000515341 1828 ntBASIC15.28■□□□□ 0.04
NKX2-1P43699 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
NKX2-1P43699 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NKX2-1P43699 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
NKX2-1P43699 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NKX2-1P43699 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC15.28■□□□□ 0.04
NKX2-1P43699 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NKX2-1P43699 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
NKX2-1P43699 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
NKX2-1P43699 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
NKX2-1P43699 HEIH-201ENST00000623091 1652 ntBASIC15.28■□□□□ 0.04
NKX2-1P43699 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NKX2-1P43699 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NKX2-1P43699 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
NKX2-1P43699 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NKX2-1P43699 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
NKX2-1P43699 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
NKX2-1P43699 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
NKX2-1P43699 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
NKX2-1P43699 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
NKX2-1P43699 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
NKX2-1P43699 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
NKX2-1P43699 GAS2L1P1-201ENST00000420145 1480 ntBASIC15.27■□□□□ 0.04
NKX2-1P43699 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
NKX2-1P43699 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
NKX2-1P43699 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
NKX2-1P43699 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC15.27■□□□□ 0.04
NKX2-1P43699 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
NKX2-1P43699 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
NKX2-1P43699 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.04
NKX2-1P43699 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
NKX2-1P43699 CROCCP1-201ENST00000426910 5675 ntBASIC15.27■□□□□ 0.04
NKX2-1P43699 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC15.27■□□□□ 0.04
NKX2-1P43699 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
NKX2-1P43699 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC15.27■□□□□ 0.04
NKX2-1P43699 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
NKX2-1P43699 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
NKX2-1P43699 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC15.27■□□□□ 0.04
NKX2-1P43699 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC15.27■□□□□ 0.04
NKX2-1P43699 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
NKX2-1P43699 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
NKX2-1P43699 ME3-201ENST00000323418 1068 ntTSL 5 BASIC15.27■□□□□ 0.04
NKX2-1P43699 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
NKX2-1P43699 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC15.27■□□□□ 0.04
NKX2-1P43699 KRT18P16-201ENST00000510337 1294 ntBASIC15.27■□□□□ 0.04
NKX2-1P43699 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC15.27■□□□□ 0.04
NKX2-1P43699 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC15.27■□□□□ 0.04
NKX2-1P43699 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC15.27■□□□□ 0.04
NKX2-1P43699 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
NKX2-1P43699 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC15.27■□□□□ 0.03
NKX2-1P43699 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC15.27■□□□□ 0.03
NKX2-1P43699 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC15.27■□□□□ 0.03
NKX2-1P43699 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
NKX2-1P43699 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.03
NKX2-1P43699 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC15.27■□□□□ 0.03
NKX2-1P43699 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
NKX2-1P43699 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC15.27■□□□□ 0.03
NKX2-1P43699 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
NKX2-1P43699 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
NKX2-1P43699 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
NKX2-1P43699 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC15.27■□□□□ 0.03
NKX2-1P43699 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC15.26■□□□□ 0.03
NKX2-1P43699 SIRPAP1-201ENST00000448467 1770 ntBASIC15.26■□□□□ 0.03
NKX2-1P43699 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
NKX2-1P43699 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NKX2-1P43699 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
NKX2-1P43699 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
NKX2-1P43699 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NKX2-1P43699 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC15.26■□□□□ 0.03
NKX2-1P43699 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NKX2-1P43699 MFF-205ENST00000354503 1085 ntTSL 2 BASIC15.26■□□□□ 0.03
NKX2-1P43699 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC15.26■□□□□ 0.03
NKX2-1P43699 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC15.26■□□□□ 0.03
NKX2-1P43699 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
NKX2-1P43699 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC15.26■□□□□ 0.03
NKX2-1P43699 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC15.26■□□□□ 0.03
NKX2-1P43699 MYC-208ENST00000641036 567 ntBASIC15.26■□□□□ 0.03
NKX2-1P43699 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
NKX2-1P43699 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
NKX2-1P43699 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NKX2-1P43699 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NKX2-1P43699 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
NKX2-1P43699 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC15.26■□□□□ 0.03
NKX2-1P43699 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms