Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 MYLKP1-201ENST00000509077 1580 ntBASIC19.54■□□□□ 0.72
SLC1A1P43005 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
SLC1A1P43005 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SLC1A1P43005 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SLC1A1P43005 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC19.54■□□□□ 0.72
SLC1A1P43005 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SLC1A1P43005 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SLC1A1P43005 ENSA-205ENST00000361532 792 ntTSL 2 BASIC19.54■□□□□ 0.72
SLC1A1P43005 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
SLC1A1P43005 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SLC1A1P43005 AC116562.2-201ENST00000507042 360 ntBASIC19.54■□□□□ 0.72
SLC1A1P43005 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC19.54■□□□□ 0.72
SLC1A1P43005 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC19.54■□□□□ 0.72
SLC1A1P43005 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC19.54■□□□□ 0.72
SLC1A1P43005 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
SLC1A1P43005 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
SLC1A1P43005 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SLC1A1P43005 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC19.54■□□□□ 0.72
SLC1A1P43005 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SLC1A1P43005 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SLC1A1P43005 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
SLC1A1P43005 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC19.54■□□□□ 0.72
SLC1A1P43005 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SLC1A1P43005 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC19.53■□□□□ 0.72
SLC1A1P43005 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
SLC1A1P43005 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
SLC1A1P43005 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC19.53■□□□□ 0.72
SLC1A1P43005 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC19.53■□□□□ 0.72
SLC1A1P43005 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SLC1A1P43005 AC008556.1-201ENST00000610908 2040 ntBASIC19.53■□□□□ 0.72
SLC1A1P43005 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SLC1A1P43005 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
SLC1A1P43005 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SLC1A1P43005 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
SLC1A1P43005 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
SLC1A1P43005 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SLC1A1P43005 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC19.53■□□□□ 0.72
SLC1A1P43005 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
SLC1A1P43005 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SLC1A1P43005 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SLC1A1P43005 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC19.53■□□□□ 0.72
SLC1A1P43005 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SLC1A1P43005 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
SLC1A1P43005 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC19.53■□□□□ 0.72
SLC1A1P43005 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SLC1A1P43005 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
SLC1A1P43005 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SLC1A1P43005 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SLC1A1P43005 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
SLC1A1P43005 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
SLC1A1P43005 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
SLC1A1P43005 NOC2LP2-201ENST00000407594 1944 ntBASIC19.53■□□□□ 0.72
SLC1A1P43005 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
SLC1A1P43005 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
SLC1A1P43005 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SLC1A1P43005 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
SLC1A1P43005 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
SLC1A1P43005 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
SLC1A1P43005 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SLC1A1P43005 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SLC1A1P43005 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC19.52■□□□□ 0.72
SLC1A1P43005 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
SLC1A1P43005 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC19.52■□□□□ 0.72
SLC1A1P43005 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC19.52■□□□□ 0.72
SLC1A1P43005 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC19.52■□□□□ 0.72
SLC1A1P43005 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC19.52■□□□□ 0.72
SLC1A1P43005 AC008622.2-201ENST00000617006 1229 ntBASIC19.52■□□□□ 0.72
SLC1A1P43005 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SLC1A1P43005 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SLC1A1P43005 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
SLC1A1P43005 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
SLC1A1P43005 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
SLC1A1P43005 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.71
SLC1A1P43005 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
SLC1A1P43005 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SLC1A1P43005 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC19.51■□□□□ 0.71
SLC1A1P43005 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SLC1A1P43005 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC19.51■□□□□ 0.71
SLC1A1P43005 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
SLC1A1P43005 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SLC1A1P43005 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SLC1A1P43005 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC19.51■□□□□ 0.71
SLC1A1P43005 MIR564-202ENST00000385049 94 ntBASIC19.51■□□□□ 0.71
SLC1A1P43005 AP000593.1-201ENST00000393668 712 ntBASIC19.51■□□□□ 0.71
SLC1A1P43005 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SLC1A1P43005 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SLC1A1P43005 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SLC1A1P43005 NUDT16P1-203ENST00000513809 620 ntBASIC19.51■□□□□ 0.71
SLC1A1P43005 DENND3-207ENST00000518347 850 ntTSL 2 BASIC19.51■□□□□ 0.71
SLC1A1P43005 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC19.51■□□□□ 0.71
SLC1A1P43005 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC19.51■□□□□ 0.71
SLC1A1P43005 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC19.51■□□□□ 0.71
SLC1A1P43005 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
SLC1A1P43005 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
SLC1A1P43005 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
SLC1A1P43005 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SLC1A1P43005 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC19.51■□□□□ 0.71
SLC1A1P43005 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC19.51■□□□□ 0.71
SLC1A1P43005 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SLC1A1P43005 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms