Protein–RNA interactions for Protein: P42338

PIK3CB, Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit beta isoform, humanhuman

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIK3CBP42338 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
PIK3CBP42338 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
PIK3CBP42338 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC17.92■□□□□ 0.46
PIK3CBP42338 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
PIK3CBP42338 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC17.92■□□□□ 0.46
PIK3CBP42338 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PIK3CBP42338 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PIK3CBP42338 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
PIK3CBP42338 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PIK3CBP42338 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PIK3CBP42338 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PIK3CBP42338 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
PIK3CBP42338 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC17.91■□□□□ 0.46
PIK3CBP42338 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PIK3CBP42338 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
PIK3CBP42338 ADK-206ENST00000541550 2222 ntTSL 2 BASIC17.91■□□□□ 0.46
PIK3CBP42338 AC073592.3-201ENST00000625118 1834 ntBASIC17.91■□□□□ 0.46
PIK3CBP42338 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
PIK3CBP42338 KRT8P45-201ENST00000414328 1447 ntBASIC17.91■□□□□ 0.46
PIK3CBP42338 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PIK3CBP42338 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PIK3CBP42338 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PIK3CBP42338 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PIK3CBP42338 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC17.91■□□□□ 0.46
PIK3CBP42338 GPAT2P1-201ENST00000444924 1672 ntBASIC17.91■□□□□ 0.46
PIK3CBP42338 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PIK3CBP42338 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PIK3CBP42338 TSPY17P-201ENST00000450329 467 ntBASIC17.91■□□□□ 0.46
PIK3CBP42338 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC17.91■□□□□ 0.46
PIK3CBP42338 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC17.91■□□□□ 0.46
PIK3CBP42338 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
PIK3CBP42338 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PIK3CBP42338 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC17.91■□□□□ 0.46
PIK3CBP42338 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PIK3CBP42338 AC007613.1-201ENST00000572811 2597 ntBASIC17.91■□□□□ 0.46
PIK3CBP42338 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC17.91■□□□□ 0.46
PIK3CBP42338 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PIK3CBP42338 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC17.91■□□□□ 0.46
PIK3CBP42338 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC17.91■□□□□ 0.46
PIK3CBP42338 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC17.91■□□□□ 0.46
PIK3CBP42338 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
PIK3CBP42338 AC008556.1-201ENST00000610908 2040 ntBASIC17.91■□□□□ 0.46
PIK3CBP42338 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PIK3CBP42338 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
PIK3CBP42338 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
PIK3CBP42338 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC17.9■□□□□ 0.46
PIK3CBP42338 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC17.9■□□□□ 0.46
PIK3CBP42338 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
PIK3CBP42338 AC090164.3-201ENST00000610780 2143 ntBASIC17.9■□□□□ 0.46
PIK3CBP42338 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
PIK3CBP42338 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC17.9■□□□□ 0.46
PIK3CBP42338 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PIK3CBP42338 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
PIK3CBP42338 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PIK3CBP42338 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PIK3CBP42338 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PIK3CBP42338 PRR31-201ENST00000371629 978 ntTSL 2 BASIC17.9■□□□□ 0.46
PIK3CBP42338 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PIK3CBP42338 KRT18P41-201ENST00000518924 1277 ntBASIC17.9■□□□□ 0.46
PIK3CBP42338 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC17.9■□□□□ 0.46
PIK3CBP42338 AL355075.4-201ENST00000554988 638 ntBASIC17.9■□□□□ 0.46
PIK3CBP42338 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC17.9■□□□□ 0.46
PIK3CBP42338 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
PIK3CBP42338 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC17.9■□□□□ 0.46
PIK3CBP42338 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC17.9■□□□□ 0.46
PIK3CBP42338 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PIK3CBP42338 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
PIK3CBP42338 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC17.9■□□□□ 0.46
PIK3CBP42338 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PIK3CBP42338 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PIK3CBP42338 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
PIK3CBP42338 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
PIK3CBP42338 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
PIK3CBP42338 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PIK3CBP42338 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
PIK3CBP42338 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PIK3CBP42338 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC17.89■□□□□ 0.45
PIK3CBP42338 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC17.89■□□□□ 0.45
PIK3CBP42338 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PIK3CBP42338 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC17.89■□□□□ 0.45
PIK3CBP42338 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC17.89■□□□□ 0.45
PIK3CBP42338 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PIK3CBP42338 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PIK3CBP42338 MIR564-202ENST00000385049 94 ntBASIC17.89■□□□□ 0.45
PIK3CBP42338 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC17.89■□□□□ 0.45
PIK3CBP42338 CCR12P-201ENST00000446203 998 ntBASIC17.89■□□□□ 0.45
PIK3CBP42338 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC17.89■□□□□ 0.45
PIK3CBP42338 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC17.89■□□□□ 0.45
PIK3CBP42338 DET1-205ENST00000558413 583 ntTSL 4 BASIC17.89■□□□□ 0.45
PIK3CBP42338 AL353719.1-201ENST00000566847 864 ntBASIC17.89■□□□□ 0.45
PIK3CBP42338 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC17.89■□□□□ 0.45
PIK3CBP42338 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC17.89■□□□□ 0.45
PIK3CBP42338 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PIK3CBP42338 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC17.89■□□□□ 0.45
PIK3CBP42338 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PIK3CBP42338 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PIK3CBP42338 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PIK3CBP42338 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC17.89■□□□□ 0.45
PIK3CBP42338 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PIK3CBP42338 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 65.1 ms