Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC19.72■□□□□ 0.75
CTNNA1P35221 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CTNNA1P35221 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC19.72■□□□□ 0.75
CTNNA1P35221 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CTNNA1P35221 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CTNNA1P35221 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
CTNNA1P35221 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
CTNNA1P35221 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC19.72■□□□□ 0.75
CTNNA1P35221 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CTNNA1P35221 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CTNNA1P35221 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CTNNA1P35221 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
CTNNA1P35221 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CTNNA1P35221 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CTNNA1P35221 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC19.71■□□□□ 0.75
CTNNA1P35221 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CTNNA1P35221 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CTNNA1P35221 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CTNNA1P35221 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
CTNNA1P35221 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC19.71■□□□□ 0.75
CTNNA1P35221 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC19.71■□□□□ 0.75
CTNNA1P35221 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
CTNNA1P35221 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC19.71■□□□□ 0.75
CTNNA1P35221 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CTNNA1P35221 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CTNNA1P35221 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CTNNA1P35221 ESRRAP1-201ENST00000400596 1257 ntBASIC19.71■□□□□ 0.75
CTNNA1P35221 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC19.71■□□□□ 0.75
CTNNA1P35221 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CTNNA1P35221 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC19.71■□□□□ 0.75
CTNNA1P35221 KRT18P6-201ENST00000555540 1265 ntBASIC19.71■□□□□ 0.75
CTNNA1P35221 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CTNNA1P35221 AC110285.5-201ENST00000611501 352 ntBASIC19.71■□□□□ 0.75
CTNNA1P35221 BCL2-203ENST00000589955 5011 ntBASIC19.71■□□□□ 0.75
CTNNA1P35221 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CTNNA1P35221 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC19.71■□□□□ 0.75
CTNNA1P35221 KRT8P32-201ENST00000512863 1461 ntBASIC19.71■□□□□ 0.75
CTNNA1P35221 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC19.71■□□□□ 0.75
CTNNA1P35221 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC19.71■□□□□ 0.75
CTNNA1P35221 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
CTNNA1P35221 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
CTNNA1P35221 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CTNNA1P35221 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CTNNA1P35221 HTR7P1-202ENST00000624664 4411 ntBASIC19.71■□□□□ 0.75
CTNNA1P35221 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CTNNA1P35221 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CTNNA1P35221 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CTNNA1P35221 AL499627.1-201ENST00000569373 2188 ntBASIC19.7■□□□□ 0.74
CTNNA1P35221 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CTNNA1P35221 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
CTNNA1P35221 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CTNNA1P35221 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
CTNNA1P35221 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CTNNA1P35221 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CTNNA1P35221 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CTNNA1P35221 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
CTNNA1P35221 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CTNNA1P35221 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC19.7■□□□□ 0.74
CTNNA1P35221 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
CTNNA1P35221 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CTNNA1P35221 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC19.7■□□□□ 0.74
CTNNA1P35221 RN7SL471P-201ENST00000580476 299 ntBASIC19.7■□□□□ 0.74
CTNNA1P35221 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
CTNNA1P35221 AC131212.4-201ENST00000623606 975 ntBASIC19.7■□□□□ 0.74
CTNNA1P35221 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC19.7■□□□□ 0.74
CTNNA1P35221 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC19.7■□□□□ 0.74
CTNNA1P35221 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
CTNNA1P35221 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC19.7■□□□□ 0.74
CTNNA1P35221 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC19.7■□□□□ 0.74
CTNNA1P35221 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CTNNA1P35221 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CTNNA1P35221 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC19.7■□□□□ 0.74
CTNNA1P35221 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CTNNA1P35221 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
CTNNA1P35221 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC19.7■□□□□ 0.74
CTNNA1P35221 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
CTNNA1P35221 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CTNNA1P35221 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CTNNA1P35221 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CTNNA1P35221 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC19.69■□□□□ 0.74
CTNNA1P35221 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CTNNA1P35221 KRT8P3-201ENST00000519669 1449 ntBASIC19.69■□□□□ 0.74
CTNNA1P35221 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CTNNA1P35221 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CTNNA1P35221 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
CTNNA1P35221 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC19.69■□□□□ 0.74
CTNNA1P35221 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
CTNNA1P35221 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CTNNA1P35221 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CTNNA1P35221 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CTNNA1P35221 ISG20-202ENST00000379224 540 ntTSL 3 BASIC19.69■□□□□ 0.74
CTNNA1P35221 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CTNNA1P35221 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC19.69■□□□□ 0.74
CTNNA1P35221 AL353708.3-201ENST00000610272 989 ntBASIC19.69■□□□□ 0.74
CTNNA1P35221 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CTNNA1P35221 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CTNNA1P35221 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC19.69■□□□□ 0.74
CTNNA1P35221 ABALON-201ENST00000629058 1903 ntBASIC19.68■□□□□ 0.74
CTNNA1P35221 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
CTNNA1P35221 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms