Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 AC131212.4-201ENST00000623606 975 ntBASIC19.68■□□□□ 0.74
CHRNA3P32297 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CHRNA3P32297 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CHRNA3P32297 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC19.68■□□□□ 0.74
CHRNA3P32297 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
CHRNA3P32297 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC19.68■□□□□ 0.74
CHRNA3P32297 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CHRNA3P32297 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CHRNA3P32297 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CHRNA3P32297 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
CHRNA3P32297 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC19.67■□□□□ 0.74
CHRNA3P32297 UNC93B2-201ENST00000285383 730 ntBASIC19.67■□□□□ 0.74
CHRNA3P32297 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CHRNA3P32297 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CHRNA3P32297 AC087499.1-201ENST00000418141 1075 ntBASIC19.67■□□□□ 0.74
CHRNA3P32297 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CHRNA3P32297 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CHRNA3P32297 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
CHRNA3P32297 AC026271.3-201ENST00000571884 352 ntBASIC19.67■□□□□ 0.74
CHRNA3P32297 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CHRNA3P32297 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC19.67■□□□□ 0.74
CHRNA3P32297 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
CHRNA3P32297 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC19.67■□□□□ 0.74
CHRNA3P32297 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC19.67■□□□□ 0.74
CHRNA3P32297 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC19.67■□□□□ 0.74
CHRNA3P32297 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CHRNA3P32297 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC19.67■□□□□ 0.74
CHRNA3P32297 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC19.67■□□□□ 0.74
CHRNA3P32297 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CHRNA3P32297 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CHRNA3P32297 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CHRNA3P32297 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CHRNA3P32297 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CHRNA3P32297 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CHRNA3P32297 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CHRNA3P32297 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC19.66■□□□□ 0.74
CHRNA3P32297 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC19.66■□□□□ 0.74
CHRNA3P32297 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CHRNA3P32297 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CHRNA3P32297 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CHRNA3P32297 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CHRNA3P32297 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
CHRNA3P32297 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC19.66■□□□□ 0.74
CHRNA3P32297 ECEL1P3-201ENST00000427961 737 ntBASIC19.66■□□□□ 0.74
CHRNA3P32297 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CHRNA3P32297 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CHRNA3P32297 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CHRNA3P32297 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC19.66■□□□□ 0.74
CHRNA3P32297 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC19.66■□□□□ 0.74
CHRNA3P32297 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC19.66■□□□□ 0.74
CHRNA3P32297 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC19.66■□□□□ 0.74
CHRNA3P32297 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC19.66■□□□□ 0.74
CHRNA3P32297 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC19.66■□□□□ 0.74
CHRNA3P32297 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC19.66■□□□□ 0.74
CHRNA3P32297 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
CHRNA3P32297 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
CHRNA3P32297 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
CHRNA3P32297 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
CHRNA3P32297 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CHRNA3P32297 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
CHRNA3P32297 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CHRNA3P32297 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CHRNA3P32297 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CHRNA3P32297 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
CHRNA3P32297 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
CHRNA3P32297 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CHRNA3P32297 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CHRNA3P32297 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC19.65■□□□□ 0.74
CHRNA3P32297 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CHRNA3P32297 MMP23A-201ENST00000234610 1017 ntBASIC19.65■□□□□ 0.74
CHRNA3P32297 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CHRNA3P32297 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CHRNA3P32297 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC19.65■□□□□ 0.74
CHRNA3P32297 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CHRNA3P32297 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC19.65■□□□□ 0.74
CHRNA3P32297 AP000525.1-201ENST00000608286 694 ntBASIC19.65■□□□□ 0.74
CHRNA3P32297 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC19.65■□□□□ 0.74
CHRNA3P32297 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
CHRNA3P32297 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC19.65■□□□□ 0.74
CHRNA3P32297 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
CHRNA3P32297 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
CHRNA3P32297 FSCN1P1-201ENST00000568912 1481 ntBASIC19.65■□□□□ 0.74
CHRNA3P32297 AL162741.1-201ENST00000565563 1558 ntBASIC19.65■□□□□ 0.74
CHRNA3P32297 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CHRNA3P32297 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CHRNA3P32297 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
CHRNA3P32297 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
CHRNA3P32297 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CHRNA3P32297 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CHRNA3P32297 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC19.64■□□□□ 0.74
CHRNA3P32297 AC126763.1-201ENST00000552015 2118 ntBASIC19.64■□□□□ 0.74
CHRNA3P32297 AC068880.1-201ENST00000507289 2297 ntBASIC19.64■□□□□ 0.74
CHRNA3P32297 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CHRNA3P32297 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC19.64■□□□□ 0.73
CHRNA3P32297 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
CHRNA3P32297 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CHRNA3P32297 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CHRNA3P32297 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CHRNA3P32297 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CHRNA3P32297 TSPY23P-201ENST00000440136 739 ntBASIC19.64■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms