Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SHC1P29353 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SHC1P29353 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SHC1P29353 AL133373.2-201ENST00000623187 2828 ntBASIC17.11■□□□□ 0.33
SHC1P29353 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SHC1P29353 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC17.1■□□□□ 0.33
SHC1P29353 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SHC1P29353 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SHC1P29353 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SHC1P29353 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SHC1P29353 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
SHC1P29353 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
SHC1P29353 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC17.1■□□□□ 0.33
SHC1P29353 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC17.1■□□□□ 0.33
SHC1P29353 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SHC1P29353 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
SHC1P29353 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC17.1■□□□□ 0.33
SHC1P29353 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SHC1P29353 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
SHC1P29353 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SHC1P29353 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC17.1■□□□□ 0.33
SHC1P29353 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SHC1P29353 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SHC1P29353 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC17.1■□□□□ 0.33
SHC1P29353 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC17.1■□□□□ 0.33
SHC1P29353 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
SHC1P29353 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC17.1■□□□□ 0.33
SHC1P29353 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
SHC1P29353 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC17.1■□□□□ 0.33
SHC1P29353 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SHC1P29353 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SHC1P29353 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SHC1P29353 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC17.1■□□□□ 0.33
SHC1P29353 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SHC1P29353 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SHC1P29353 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SHC1P29353 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SHC1P29353 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SHC1P29353 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC17.09■□□□□ 0.33
SHC1P29353 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC17.09■□□□□ 0.33
SHC1P29353 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC17.09■□□□□ 0.33
SHC1P29353 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SHC1P29353 WIZP1-201ENST00000531444 2299 ntBASIC17.09■□□□□ 0.33
SHC1P29353 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SHC1P29353 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC17.09■□□□□ 0.33
SHC1P29353 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
SHC1P29353 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
SHC1P29353 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SHC1P29353 INGX-201ENST00000359239 846 ntBASIC17.09■□□□□ 0.33
SHC1P29353 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC17.09■□□□□ 0.33
SHC1P29353 RPS20-210ENST00000523936 899 ntTSL 2 BASIC17.09■□□□□ 0.33
SHC1P29353 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SHC1P29353 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SHC1P29353 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SHC1P29353 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SHC1P29353 AC090164.3-201ENST00000610780 2143 ntBASIC17.09■□□□□ 0.33
SHC1P29353 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SHC1P29353 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SHC1P29353 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
SHC1P29353 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17.08■□□□□ 0.33
SHC1P29353 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC17.08■□□□□ 0.33
SHC1P29353 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC17.08■□□□□ 0.33
SHC1P29353 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
SHC1P29353 TBC1D3P2-202ENST00000577902 1649 ntBASIC17.08■□□□□ 0.32
SHC1P29353 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.32
SHC1P29353 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC17.08■□□□□ 0.32
SHC1P29353 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SHC1P29353 HIST1H2APS4-201ENST00000362070 348 ntBASIC17.08■□□□□ 0.32
SHC1P29353 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
SHC1P29353 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SHC1P29353 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC17.08■□□□□ 0.32
SHC1P29353 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SHC1P29353 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SHC1P29353 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SHC1P29353 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC17.08■□□□□ 0.32
SHC1P29353 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
SHC1P29353 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC17.08■□□□□ 0.32
SHC1P29353 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC17.08■□□□□ 0.32
SHC1P29353 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
SHC1P29353 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SHC1P29353 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
SHC1P29353 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
SHC1P29353 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
SHC1P29353 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC17.08■□□□□ 0.32
SHC1P29353 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SHC1P29353 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC17.08■□□□□ 0.32
SHC1P29353 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC17.08■□□□□ 0.32
SHC1P29353 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC17.08■□□□□ 0.32
SHC1P29353 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC17.08■□□□□ 0.32
SHC1P29353 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SHC1P29353 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC17.07■□□□□ 0.32
SHC1P29353 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
SHC1P29353 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SHC1P29353 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
SHC1P29353 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SHC1P29353 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SHC1P29353 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC17.07■□□□□ 0.32
SHC1P29353 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC17.07■□□□□ 0.32
SHC1P29353 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SHC1P29353 NAPSB-206ENST00000562112 1266 ntBASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms