Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC24.38■■□□□ 1.49
RXRBP28702 AC005498.2-205ENST00000593218 784 ntBASIC24.38■■□□□ 1.49
RXRBP28702 AC011467.2-201ENST00000598425 242 ntBASIC24.38■■□□□ 1.49
RXRBP28702 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC24.38■■□□□ 1.49
RXRBP28702 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC24.38■■□□□ 1.49
RXRBP28702 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC24.38■■□□□ 1.49
RXRBP28702 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC24.38■■□□□ 1.49
RXRBP28702 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
RXRBP28702 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
RXRBP28702 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC24.38■■□□□ 1.49
RXRBP28702 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
RXRBP28702 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC24.37■■□□□ 1.49
RXRBP28702 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC24.37■■□□□ 1.49
RXRBP28702 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC24.37■■□□□ 1.49
RXRBP28702 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC24.37■■□□□ 1.49
RXRBP28702 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
RXRBP28702 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
RXRBP28702 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
RXRBP28702 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC24.37■■□□□ 1.49
RXRBP28702 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC24.37■■□□□ 1.49
RXRBP28702 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC24.37■■□□□ 1.49
RXRBP28702 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
RXRBP28702 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC24.37■■□□□ 1.49
RXRBP28702 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
RXRBP28702 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
RXRBP28702 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC24.37■■□□□ 1.49
RXRBP28702 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC24.37■■□□□ 1.49
RXRBP28702 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
RXRBP28702 AP005212.1-201ENST00000581547 1997 ntBASIC24.36■■□□□ 1.49
RXRBP28702 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC24.36■■□□□ 1.49
RXRBP28702 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC24.36■■□□□ 1.49
RXRBP28702 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC24.36■■□□□ 1.49
RXRBP28702 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC24.36■■□□□ 1.49
RXRBP28702 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC24.36■■□□□ 1.49
RXRBP28702 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
RXRBP28702 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
RXRBP28702 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC24.36■■□□□ 1.49
RXRBP28702 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
RXRBP28702 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
RXRBP28702 SLC4A1APP2-201ENST00000424054 1259 ntBASIC24.36■■□□□ 1.49
RXRBP28702 AC108751.1-201ENST00000490852 363 ntBASIC24.36■■□□□ 1.49
RXRBP28702 MSRA-206ENST00000521209 814 ntTSL 3 BASIC24.36■■□□□ 1.49
RXRBP28702 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC24.36■■□□□ 1.49
RXRBP28702 CCND1-203ENST00000536559 553 ntTSL 3 BASIC24.36■■□□□ 1.49
RXRBP28702 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
RXRBP28702 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC24.36■■□□□ 1.49
RXRBP28702 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC24.36■■□□□ 1.49
RXRBP28702 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC24.36■■□□□ 1.49
RXRBP28702 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC24.36■■□□□ 1.49
RXRBP28702 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
RXRBP28702 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
RXRBP28702 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
RXRBP28702 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
RXRBP28702 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC24.35■■□□□ 1.49
RXRBP28702 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC24.35■■□□□ 1.49
RXRBP28702 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
RXRBP28702 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC24.35■■□□□ 1.49
RXRBP28702 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC24.35■■□□□ 1.49
RXRBP28702 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC24.35■■□□□ 1.49
RXRBP28702 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC24.35■■□□□ 1.49
RXRBP28702 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC24.35■■□□□ 1.49
RXRBP28702 RNF151-202ENST00000569210 853 ntTSL 2 BASIC24.35■■□□□ 1.49
RXRBP28702 NAT14-202ENST00000587400 416 ntTSL 5 BASIC24.35■■□□□ 1.49
RXRBP28702 AC005593.1-201ENST00000624894 515 ntBASIC24.35■■□□□ 1.49
RXRBP28702 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
RXRBP28702 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
RXRBP28702 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
RXRBP28702 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC24.35■■□□□ 1.49
RXRBP28702 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
RXRBP28702 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC24.35■■□□□ 1.49
RXRBP28702 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC24.35■■□□□ 1.49
RXRBP28702 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
RXRBP28702 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC24.35■■□□□ 1.49
RXRBP28702 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
RXRBP28702 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC24.34■■□□□ 1.49
RXRBP28702 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
RXRBP28702 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC24.34■■□□□ 1.49
RXRBP28702 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
RXRBP28702 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
RXRBP28702 AC022494.1-201ENST00000466044 728 ntBASIC24.34■■□□□ 1.49
RXRBP28702 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC24.34■■□□□ 1.49
RXRBP28702 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC24.34■■□□□ 1.49
RXRBP28702 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC24.34■■□□□ 1.49
RXRBP28702 RPL28-205ENST00000558131 444 ntTSL 5 BASIC24.34■■□□□ 1.49
RXRBP28702 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
RXRBP28702 AQP6-205ENST00000618286 829 ntTSL 5 BASIC24.34■■□□□ 1.49
RXRBP28702 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
RXRBP28702 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
RXRBP28702 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
RXRBP28702 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC24.34■■□□□ 1.49
RXRBP28702 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC24.33■■□□□ 1.49
RXRBP28702 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
RXRBP28702 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
RXRBP28702 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
RXRBP28702 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC24.33■■□□□ 1.49
RXRBP28702 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
RXRBP28702 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC24.33■■□□□ 1.49
RXRBP28702 PGM5P2-202ENST00000637225 1043 ntBASIC24.33■■□□□ 1.49
RXRBP28702 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC24.33■■□□□ 1.49
RXRBP28702 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms