Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 AC092338.2-201ENST00000568827 1415 ntBASIC19.02■□□□□ 0.64
PTPN3P26045 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC19.02■□□□□ 0.64
PTPN3P26045 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PTPN3P26045 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PTPN3P26045 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PTPN3P26045 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PTPN3P26045 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC19.02■□□□□ 0.64
PTPN3P26045 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC19.02■□□□□ 0.64
PTPN3P26045 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC19.02■□□□□ 0.64
PTPN3P26045 KRT18P41-201ENST00000518924 1277 ntBASIC19.02■□□□□ 0.64
PTPN3P26045 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC19.02■□□□□ 0.64
PTPN3P26045 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC19.02■□□□□ 0.64
PTPN3P26045 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
PTPN3P26045 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
PTPN3P26045 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
PTPN3P26045 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
PTPN3P26045 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
PTPN3P26045 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
PTPN3P26045 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
PTPN3P26045 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC19.01■□□□□ 0.63
PTPN3P26045 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC19.01■□□□□ 0.63
PTPN3P26045 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
PTPN3P26045 KRT8P9-201ENST00000558927 1449 ntBASIC19.01■□□□□ 0.63
PTPN3P26045 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PTPN3P26045 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC19.01■□□□□ 0.63
PTPN3P26045 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC19.01■□□□□ 0.63
PTPN3P26045 TSPY17P-201ENST00000450329 467 ntBASIC19.01■□□□□ 0.63
PTPN3P26045 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC19.01■□□□□ 0.63
PTPN3P26045 MIR3180-5-201ENST00000583743 153 ntBASIC19.01■□□□□ 0.63
PTPN3P26045 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC19.01■□□□□ 0.63
PTPN3P26045 GLDC-219ENST00000640208 420 ntTSL 2 BASIC19.01■□□□□ 0.63
PTPN3P26045 MYC-208ENST00000641036 567 ntBASIC19.01■□□□□ 0.63
PTPN3P26045 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC19.01■□□□□ 0.63
PTPN3P26045 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
PTPN3P26045 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PTPN3P26045 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC19.01■□□□□ 0.63
PTPN3P26045 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
PTPN3P26045 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
PTPN3P26045 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC19.01■□□□□ 0.63
PTPN3P26045 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
PTPN3P26045 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PTPN3P26045 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
PTPN3P26045 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
PTPN3P26045 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
PTPN3P26045 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC19■□□□□ 0.63
PTPN3P26045 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
PTPN3P26045 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
PTPN3P26045 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC19■□□□□ 0.63
PTPN3P26045 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC19■□□□□ 0.63
PTPN3P26045 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC19■□□□□ 0.63
PTPN3P26045 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
PTPN3P26045 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC19■□□□□ 0.63
PTPN3P26045 ELP6-205ENST00000439305 880 ntTSL 2 BASIC19■□□□□ 0.63
PTPN3P26045 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC19■□□□□ 0.63
PTPN3P26045 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC19■□□□□ 0.63
PTPN3P26045 C2orf69P3-201ENST00000565542 1120 ntBASIC19■□□□□ 0.63
PTPN3P26045 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PTPN3P26045 CYP2D8P-201ENST00000433633 1490 ntBASIC19■□□□□ 0.63
PTPN3P26045 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC19■□□□□ 0.63
PTPN3P26045 AC036111.1-201ENST00000533973 1582 ntBASIC19■□□□□ 0.63
PTPN3P26045 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC19■□□□□ 0.63
PTPN3P26045 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC19■□□□□ 0.63
PTPN3P26045 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC19■□□□□ 0.63
PTPN3P26045 EFTUD1P1-204ENST00000560401 1798 ntBASIC19■□□□□ 0.63
PTPN3P26045 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
PTPN3P26045 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC19■□□□□ 0.63
PTPN3P26045 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC19■□□□□ 0.63
PTPN3P26045 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC19■□□□□ 0.63
PTPN3P26045 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PTPN3P26045 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC19■□□□□ 0.63
PTPN3P26045 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC19■□□□□ 0.63
PTPN3P26045 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
PTPN3P26045 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PTPN3P26045 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC18.99■□□□□ 0.63
PTPN3P26045 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC18.99■□□□□ 0.63
PTPN3P26045 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
PTPN3P26045 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PTPN3P26045 TSPY14P-201ENST00000303979 915 ntBASIC18.99■□□□□ 0.63
PTPN3P26045 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PTPN3P26045 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PTPN3P26045 AC007663.1-201ENST00000438948 1240 ntBASIC18.99■□□□□ 0.63
PTPN3P26045 CCR12P-201ENST00000446203 998 ntBASIC18.99■□□□□ 0.63
PTPN3P26045 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PTPN3P26045 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PTPN3P26045 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PTPN3P26045 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
PTPN3P26045 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
PTPN3P26045 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
PTPN3P26045 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
PTPN3P26045 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC18.99■□□□□ 0.63
PTPN3P26045 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
PTPN3P26045 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PTPN3P26045 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
PTPN3P26045 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC18.99■□□□□ 0.63
PTPN3P26045 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
PTPN3P26045 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.98■□□□□ 0.63
PTPN3P26045 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PTPN3P26045 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC18.98■□□□□ 0.63
PTPN3P26045 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PTPN3P26045 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms