Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CHMP24386 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
CHMP24386 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC17.45■□□□□ 0.38
CHMP24386 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CHMP24386 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC17.45■□□□□ 0.38
CHMP24386 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
CHMP24386 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CHMP24386 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
CHMP24386 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CHMP24386 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CHMP24386 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CHMP24386 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC17.44■□□□□ 0.38
CHMP24386 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CHMP24386 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CHMP24386 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CHMP24386 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
CHMP24386 AC004951.3-201ENST00000418645 1148 ntBASIC17.44■□□□□ 0.38
CHMP24386 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC17.44■□□□□ 0.38
CHMP24386 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC17.44■□□□□ 0.38
CHMP24386 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC17.44■□□□□ 0.38
CHMP24386 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC17.44■□□□□ 0.38
CHMP24386 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC17.44■□□□□ 0.38
CHMP24386 GRAMD4P8-201ENST00000605465 1115 ntBASIC17.44■□□□□ 0.38
CHMP24386 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC17.44■□□□□ 0.38
CHMP24386 AC130371.2-201ENST00000619443 611 ntBASIC17.44■□□□□ 0.38
CHMP24386 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CHMP24386 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
CHMP24386 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
CHMP24386 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC17.44■□□□□ 0.38
CHMP24386 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CHMP24386 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CHMP24386 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CHMP24386 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CHMP24386 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CHMP24386 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC17.44■□□□□ 0.38
CHMP24386 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
CHMP24386 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
CHMP24386 RCC2P6-201ENST00000526625 1557 ntBASIC17.44■□□□□ 0.38
CHMP24386 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CHMP24386 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC17.44■□□□□ 0.38
CHMP24386 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
CHMP24386 ANO7L1-203ENST00000602586 1720 ntBASIC17.44■□□□□ 0.38
CHMP24386 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CHMP24386 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CHMP24386 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CHMP24386 LTB4R2-202ENST00000528054 3092 ntBASIC17.44■□□□□ 0.38
CHMP24386 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CHMP24386 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC17.43■□□□□ 0.38
CHMP24386 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CHMP24386 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC17.43■□□□□ 0.38
CHMP24386 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CHMP24386 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CHMP24386 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
CHMP24386 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CHMP24386 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CHMP24386 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CHMP24386 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC17.43■□□□□ 0.38
CHMP24386 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
CHMP24386 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CHMP24386 TSPY15P-201ENST00000457163 923 ntBASIC17.43■□□□□ 0.38
CHMP24386 AC011506.1-201ENST00000474329 610 ntBASIC17.43■□□□□ 0.38
CHMP24386 Z85996.1-201ENST00000494644 937 ntBASIC17.43■□□□□ 0.38
CHMP24386 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CHMP24386 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC17.43■□□□□ 0.38
CHMP24386 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CHMP24386 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC17.43■□□□□ 0.38
CHMP24386 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CHMP24386 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CHMP24386 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CHMP24386 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC17.43■□□□□ 0.38
CHMP24386 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CHMP24386 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC17.43■□□□□ 0.38
CHMP24386 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CHMP24386 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CHMP24386 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CHMP24386 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CHMP24386 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CHMP24386 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CHMP24386 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
CHMP24386 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CHMP24386 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CHMP24386 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CHMP24386 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CHMP24386 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CHMP24386 MMP23A-201ENST00000234610 1017 ntBASIC17.42■□□□□ 0.38
CHMP24386 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CHMP24386 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
CHMP24386 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
CHMP24386 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CHMP24386 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC17.42■□□□□ 0.38
CHMP24386 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC17.42■□□□□ 0.38
CHMP24386 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC17.42■□□□□ 0.38
CHMP24386 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC17.42■□□□□ 0.38
CHMP24386 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC17.42■□□□□ 0.38
CHMP24386 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC17.42■□□□□ 0.38
CHMP24386 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC17.42■□□□□ 0.38
CHMP24386 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC17.42■□□□□ 0.38
CHMP24386 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CHMP24386 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC17.42■□□□□ 0.38
CHMP24386 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms