Protein–RNA interactions for Protein: P24347

MMP11, Stromelysin-3, humanhuman

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11P24347 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
MMP11P24347 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
MMP11P24347 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.43
MMP11P24347 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC17.71■□□□□ 0.43
MMP11P24347 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
MMP11P24347 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC17.71■□□□□ 0.43
MMP11P24347 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
MMP11P24347 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
MMP11P24347 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
MMP11P24347 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC17.71■□□□□ 0.43
MMP11P24347 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC17.71■□□□□ 0.43
MMP11P24347 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC17.71■□□□□ 0.42
MMP11P24347 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.42
MMP11P24347 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC17.71■□□□□ 0.42
MMP11P24347 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.42
MMP11P24347 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC17.71■□□□□ 0.42
MMP11P24347 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
MMP11P24347 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC17.71■□□□□ 0.42
MMP11P24347 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC17.71■□□□□ 0.42
MMP11P24347 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC17.71■□□□□ 0.42
MMP11P24347 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
MMP11P24347 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
MMP11P24347 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC17.7■□□□□ 0.42
MMP11P24347 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
MMP11P24347 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
MMP11P24347 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
MMP11P24347 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
MMP11P24347 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC17.7■□□□□ 0.42
MMP11P24347 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
MMP11P24347 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
MMP11P24347 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
MMP11P24347 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
MMP11P24347 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
MMP11P24347 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
MMP11P24347 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
MMP11P24347 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
MMP11P24347 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
MMP11P24347 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
MMP11P24347 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC17.7■□□□□ 0.42
MMP11P24347 ETFA-216ENST00000560726 942 ntTSL 3 BASIC17.7■□□□□ 0.42
MMP11P24347 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC17.7■□□□□ 0.42
MMP11P24347 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC17.7■□□□□ 0.42
MMP11P24347 AC091076.1-201ENST00000610741 619 ntBASIC17.7■□□□□ 0.42
MMP11P24347 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
MMP11P24347 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
MMP11P24347 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC17.7■□□□□ 0.42
MMP11P24347 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC17.7■□□□□ 0.42
MMP11P24347 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
MMP11P24347 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
MMP11P24347 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC17.7■□□□□ 0.42
MMP11P24347 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
MMP11P24347 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
MMP11P24347 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
MMP11P24347 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
MMP11P24347 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
MMP11P24347 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
MMP11P24347 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
MMP11P24347 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC17.69■□□□□ 0.42
MMP11P24347 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
MMP11P24347 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
MMP11P24347 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC17.69■□□□□ 0.42
MMP11P24347 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC17.69■□□□□ 0.42
MMP11P24347 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
MMP11P24347 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
MMP11P24347 ISCU-203ENST00000431221 799 ntTSL 2 BASIC17.69■□□□□ 0.42
MMP11P24347 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
MMP11P24347 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC17.69■□□□□ 0.42
MMP11P24347 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC17.69■□□□□ 0.42
MMP11P24347 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
MMP11P24347 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
MMP11P24347 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC17.69■□□□□ 0.42
MMP11P24347 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC17.69■□□□□ 0.42
MMP11P24347 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC17.69■□□□□ 0.42
MMP11P24347 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
MMP11P24347 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC17.69■□□□□ 0.42
MMP11P24347 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC17.69■□□□□ 0.42
MMP11P24347 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
MMP11P24347 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
MMP11P24347 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
MMP11P24347 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
MMP11P24347 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC17.69■□□□□ 0.42
MMP11P24347 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
MMP11P24347 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
MMP11P24347 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC17.68■□□□□ 0.42
MMP11P24347 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC17.68■□□□□ 0.42
MMP11P24347 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
MMP11P24347 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
MMP11P24347 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
MMP11P24347 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
MMP11P24347 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
MMP11P24347 AIRN-201ENST00000601203 4374 ntBASIC17.68■□□□□ 0.42
MMP11P24347 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC17.68■□□□□ 0.42
MMP11P24347 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
MMP11P24347 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
MMP11P24347 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC17.68■□□□□ 0.42
MMP11P24347 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
MMP11P24347 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC17.68■□□□□ 0.42
MMP11P24347 AL359075.1-203ENST00000462729 1002 ntBASIC17.68■□□□□ 0.42
MMP11P24347 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC17.68■□□□□ 0.42
MMP11P24347 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms